Lycium barbarum (goji berry): 132635683
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Entry
132635683 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132635683 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
132635683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132635683
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
132635683
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
TPR_1
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
132635683
NCBI-ProteinID:
XP_060208159
LinkDB
All DBs
Position
4:27530665..27608145
Genome browser
AA seq
2496 aa
AA seq
DB search
MEDNKDTELLCKVSANHLFLAQFEPFRATLRSLRARNPELSRAILQTVVAHGGKFDSITW
STSCPSPQLLTFLCTLELLQFNEPTSQLWSFDADALKLRAEFCLYLQNVISRVSDRISSL
KLDEEAVENEDLKVLGESLRVLVKISDMGLRRLRPDLIEMESEGDIVVEEEEMMCLRGVF
LENADIFDVLSLNIEKQVGWIVNEDSDMAITVRTVVKNKEVDDKVLKSLQKCIQIAHLDA
MRECLMNNDVDGAVSHIRFLHLNYGINEEEYRVVSKDLLRRVLPGKDDYGDAWREMRDKF
LSVYGEALSSRCTPLVKMIQVIHDEMLLEEIESVKASESDQIPLPIQRLQKFIRELNSET
TLNNTNSLLETLIASCMREMYQYARVRGVHVLECIMDAALSAVRKEELQEASDILLLSPR
LQPLLAVLGWDLLSGKTGLRRKLMQLLWTSKSQVLRLEDSPHYGNRSDEVSCIEHLCDLL
CYQLDLASFVACVNSGKSWSLKSSLLLSGKEFMQQGNEDVQWDPFVENFVLERLSVQSPL
RVLFDVVPSIKFQDAIELISMQPITSNLAAWRRMEDIELMHMRYALESAVLALGEMEKNI
GDGVGNDQINLCYLKDLKNHLDAINNIFRKILMVNIIISLLHMDGLSLNLTTCASSSRSS
ESSNISNEQQFEDTTQDGRNKTVVIFIGQLLNILRQYLPSANSEKENNWEVNVCAGIKEA
IEWRIMNAKRFIEDWEWRLSILQCLMPFSERQWRWREALTILRAAPSKLLNLCMQRAKYD
IGEEAVNRFSLPPEDKATLELAEWVDSAFGRASVEDAVCRAADGTSPVQELDFSSLRAQL
GPLPAILLCVDIAATSAKSSNISWKLLSQAQVMLSEIYPGNSPKIGSTYWDQICEVAVIS
VIKRVLKRLQEQLEQDKPSTLQDILTGEMILLSSKDFHRQGHKERALAMLHQMIEDAHMG
KRQFLSGKLHNLARALADEETEREQVEDGSRSDRKGLLLYNKNGVLGLGLKTLKQPTTTS
AAGDNNIPSGSYDVKETGKRLFGPFSSRMTTFLSQFVLYLAAIGDIVDGADTTHDFNYFS
LVYEWPKDLLTRLVFEQGSTDAAEKAAEIMNADFVHEVISACVPPVYPPRYGHGWACIPV
IPTYTDNYSENRVISPSCREAKPGSFTPSSGDAELPLYPLQLDIVKHLIKLSPVRAVLAC
VFGSSILYRGRDTTVSRSLKSCFLQTPDADRLFFEFALDQSERFPTLNRWIQMQTNLHRI
SEFAIMADPTTSDGKDVPECKLAMKRFRDHDSDAESEVDELAGSSNISTNPQETKNETRG
SSDPWHDSLKSENPDRTTIFLSFDCENEGPYEKAVERLIDEGKVMDALAISDRFLQNGAS
DQLLQLLIERGEENISGLSQGYSGNNNWSHSWQYCLRLKDKQLAARLALKYLRRWELDAA
LDVLTMCSCHLLENDPIKDVVVQMRQALLRYSHILSADNRFHSWLEVESECKEDPEGLAL
RLAEKGAVSAALEVAESEGLSIELRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLRDT
ADALPVAMSAMQLLPNLRSKQLLVHFFLKRRDNNLSELEVSRLNSWALGLRVLAALPLPL
QQKCSPLHEHPHLILEVLLMRKQLQSASLILKEFPSLRDNNMILIYAAKAINVSISSPSR
DPRISISTPRARQKTKVGTPTRSSFTSSLSNFQKEARRAFSWVQTGDKGTAKDTQRKRKS
SGVMQSERVAWEPTAAIQEDRVTLFSADGQERLPAVAIAEMWMLTGDPKKDEAVRSSHRY
ESTPDITLFKALLSMCSDESASAKGALDLCVGQMKSVLSSLQLPENATMEIIGRAYHATE
TFVEGLLFAKFLLRKLSGSTDLSSDLQRSKDADDASSDAGSSSVGSQSTDELSEVLGQAE
MWLGRAELLQSLLGSGVAASLDDIADKESSERLRNRLILDERYSMAVYTSKKCKIDVFPV
WNAWGHALIRMERYTQARVKFKQALQLYKGDAATVIMEIIGTIEGGPPVDVSSVRSMYEH
LARSAPAILDDSLSADSYLNVLYMPSTFPRSERFRDSQEASNDNSFNSTHFEDEPRSNLD
SVRYIECISYLQEYARQHMLDFMFRHGHYKDACLLFFPPNSVPPPPQPSSLGVVTSSSSP
QRQDPLATDYGTLDLLCDLCIAYGAMPVLEEVLSGRTSNITSDDQSVNQHTTAALSRICN
YCETHKHFNYLYKFQVIKKDHVAAGLCCIQLFMNSSSQEEAIRHLENAKMHFEEGLSARH
KAAESTKLITKGIRGKSASGKLTEEGLVKFSARVAIEIDVVKCFNDAEGPQWKHSLFGNP
NDPATFRRRCEIAETLAERNFDLAFQVIHEFNLPAVDIYAGVAASLAERKRGSQLTEFFR
NIKGTIDDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIA
SRSGSVADVQYVAHQALHANALPVLDMCKQWLSQYM
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaacaaagacacagagctgttgtgtaaagtcagcgctaaccatcttttctta
gctcaattcgagccatttcgagccactttacgtagtcttcgtgctcgaaatcccgaactt
tctcgagcaattcttcaaacagttgttgcacatggcggaaaattcgattctattacctgg
tccacgtcatgcccttctcctcaactccttactttcctttgtacccttgaacttttacaa
tttaacgaacccacctctcaactttggtcttttgatgctgatgcccttaaattaagagct
gaattctgtttgtacttgcaaaatgtgatttcaagggtttcggataggatttcgagtttg
aaattggatgaagaagctgttgaaaatgaggatttgaaggttttaggtgaaagtttgagg
gttttggtgaaaatttcggatatggggttgaggcgattgaggcccgatttgattgaaatg
gagagtgagggagatattgtagtggaggaagaggaaatgatgtgtttgaggggagtgttt
ttggaaaatgcagatattttcgatgttttgagtctgaatatagagaagcaagttggttgg
attgtaaatgaggattcagatatggcgattacagtcaggacggtcgtaaagaataaggag
gttgatgataaggtgcttaaatcgctgcaaaaatgcattcaaatcgcacatttggatgct
atgagggaatgcctaatgaataatgatgtggatggagctgtttcgcatattcgttttcta
catttgaattatggtatcaatgaggaggagtatcgcgtggtctcaaaagatctactcagg
agggtgttacctgggaaggatgattatggagatgcctggcgtgagatgcgagacaaattc
ttgtcagtttatggggaagcactttcatctcgttgtacacctcttgttaagatgatacag
gttattcacgatgaaatgctcttggaagagattgagagtgtcaaagcttctgaaagtgat
cagattcctctacctattcagcgtctccaaaaatttatccgagaactgaattctgagaca
actttaaacaacacaaattcattgctggagactcttattgcttcttgcatgagagaaatg
taccagtacgctcgtgttcgtggcgtgcatgtcctggaatgtatcatggacgctgccctg
tctgctgtgagaaaggaggaactgcaagaagctagcgatattcttttgctgtctccccgg
ctccaacctcttctagccgtccttggttgggatcttttgtctggtaaaacgggtttaaga
aggaaattgatgcagcttctgtggacaagtaaatcacaagttcttcgtctggaagactcc
ccacattatgggaacagatcagatgaggtgtcctgcattgaacatctctgtgatctcctg
tgttatcagcttgatcttgcttcttttgtagcatgtgtgaattctggcaagtcatggagt
ttgaagtcctcgctactgttatctggtaaagagtttatgcagcaaggaaatgaagatgtg
caatgggatccctttgttgaaaattttgtgctggaaagattatctgtacagagtcctttg
cgggtattgtttgatgtggttccaagcattaagtttcaagatgctattgaactgatcagc
atgcagccaattacttccaatctagcagcctggaggaggatggaagacattgagctcatg
cacatgcgttatgctttggaatctgctgtccttgcactcggagagatggaaaagaatata
ggggacggagtaggaaatgaccaaatcaatttgtgctacctgaaagatctgaagaaccat
cttgatgccatcaacaatattttccgaaagatattgatggtgaacattatcatctctctt
ctgcatatggatggtctctctctcaatttgacaacttgtgcttcatcaagccgctcatct
gagtcatcaaatatatctaacgagcaacaatttgaggatacaactcaagatggacgaaat
aagaccgttgtaatatttatagggcaactattgaatattttacggcagtatctaccatct
gcaaactcagagaaggaaaataattgggaagtcaacgtgtgtgctggtattaaagaagcc
atagaatggagaattatgaatgccaaaagatttattgaggattgggaatggcgtttgtca
attttgcagtgccttatgccattctccgaaagacagtggagatggagggaggctcttact
atactacgtgcagccccttcaaaactgctaaacctctgtatgcaaagggcaaaatatgat
attggggaagaggctgtcaaccgtttctctttgcctccagaagacaaagcaacactagag
ctggctgagtgggtagatagtgcctttggaagagcatctgttgaagatgctgtttgccgt
gctgctgatggaacttctccggtccaagaactggatttctcttctttacgtgctcagcta
ggtcctctaccagctattctcctgtgcgttgatatagctgcaacttctgcaaaatcttca
aacatatcctggaagctgttaagtcaggctcaagttatgttgtcagagatttaccctggt
aattcccctaaaattgggtcaacctactgggatcagatttgtgaagtagcagttatatct
gtaatcaagcgtgtccttaagcgtttacaggaacaactggaacaggataagccttcaact
cttcaagacattttaactggagaaatgatccttttatcctcaaaggattttcaccggcaa
ggacataaagagcgtgcactagctatgctgcatcaaatgattgaagatgctcatatgggg
aagagacagtttcttagcggtaagctccacaatttggcaagagctttagccgatgaagaa
acagagagggaacaggttgaggatggctcacgttctgacaggaaaggattgttactgtac
aacaaaaatggagttcttgggcttgggttgaaaaccttgaagcagccgacgacaacttca
gcagctggtgacaacaacataccttctggtagctatgatgtcaaggaaactggaaaaaga
ttatttgggccattcagctccagaatgaccacatttctctctcaatttgttctctacctt
gctgccattggtgacattgtcgatggggctgataccactcatgacttcaactacttctcc
cttgtgtatgaatggcctaaagaccttttaactcgtcttgtgtttgagcaaggcagtact
gatgcagctgaaaaggcagcagagattatgaatgctgattttgtccatgaagtgatttct
gcttgtgttcctccagtttatcctccaagatatggtcatggttgggcttgcatcccggta
attcctacatacactgataattactctgaaaatagagtaatatccccgtcatgtagagag
gccaagccggggtctttcactccttcctctggggatgctgaattacctctttatcctctt
caattggatatagtgaagcatctcattaagttatccccagttagagctgtattagcatgt
gtctttggaagttctatactttatcgtggcagggacactactgtatcaagatctctgaaa
agttgctttctacaaactcctgatgctgataggttgttctttgagtttgctcttgaccaa
tctgagaggttccctaccttgaatcgctggatacagatgcagaccaatcttcatcgaatc
tcagaatttgcaataatggctgatcccacgacgagtgatggtaaagatgtacctgaatgt
aaacttgctatgaagcgatttcgtgatcatgatagtgatgctgaatccgaagttgatgaa
cttgctggtagcagtaatatatcaacaaatccccaggagaccaagaatgaaacgagagga
tcttctgatccttggcatgattccttaaaatccgaaaatcctgatcgtactacaattttt
ctttcttttgattgcgagaatgaaggcccatatgagaaagctgtggaacggttgattgat
gaaggaaaagtgatggatgctcttgcaatttctgatcgtttcttgcaaaatggggcctca
gatcagttgcttcagttgctaattgaacggggggaagaaaatatatctggactgtctcaa
ggttattcaggaaacaataattggagccacagctggcagtactgtctccgtttgaaagat
aaacaattggcagctagacttgcgctcaaatatttgcgtagatgggaactggatgctgct
ttggatgttctcactatgtgcagctgccacttgctcgaaaatgatcctattaaagatgtg
gttgttcagatgagacaagctctcctgaggtacagccatatattaagtgcagataaccgc
ttccacagctggctagaggtggagtctgagtgtaaagaagatcctgagggtcttgccctt
agattagctgagaagggagctgtttctgctgctttagaagtggctgaaagtgaagggcta
tctattgaactgcgcagagagctgcaggggcgtcaacttgtgaagcttttaacagcagat
cctttaaacggtggaggccctgcagaagcttcacgttttctttcttctttacgcgacact
gcagatgctttacctgttgcaatgagtgcaatgcagcttttgcccaaccttcgatctaaa
cagcttctcgttcactttttcctgaaacgaagagataataatttatcagagttggaagtt
tccaggctcaactcctgggcattaggattacgtgttctggctgctttgccattaccgttg
cagcaaaaatgctctcccctacacgagcaccctcatttgattcttgaagttttgctgatg
agaaaacaacttcaatctgcatctctgatacttaaggaattcccctccttgagagacaac
aatatgattcttatatatgctgccaaagctattaatgtcagcattagttccccttccagg
gacccaaggatttcaatttcaactccaagagcaagacagaagacaaaagtgggaacaccc
acaaggtcatcattcactagtagtcttagtaattttcaaaaagaggcccgcagagcattt
tcatgggtccaaactggagataaaggtacagccaaggatacacaaaggaagagaaagagc
tctggagtaatgcaatcagagagggtggcttgggagccaactgctgccattcaggaagac
cgtgttacattattttctgcagatgggcaagaacggctgcctgctgttgctattgctgag
atgtggatgctcacaggtgacccgaagaaggacgaagctgtccgttcttctcatcgctat
gaaagtacccccgatattactctcttcaaggcactgctttcaatgtgttcggatgagagt
gcatctgccaaaggtgctttggacttgtgcgttggccagatgaaaagtgtattaagctcc
ctacagttacctgagaatgcaacaatggaaattattggccgagcgtatcatgccacagaa
acttttgttgagggcctgctttttgctaaattcctccttagaaagctttctggaagcact
gacttgtctagtgatttgcaaagaagtaaggatgcagatgatgcatcttctgatgctggc
agctctagtgtgggtagtcagtcgacagatgagctgtctgaagtactgggacaagctgag
atgtggctaggacgtgctgaattgctgcaaagtcttttgggttccggagtagctgcttca
cttgatgatatcgcggataaagagtcatctgagcgtcttcggaatagattaattctagat
gaaagatacagcatggctgtttacacttccaagaagtgtaagattgatgttttccctgtg
tggaatgcatgggggcatgctctgattaggatggagcgctatactcaagctcgtgttaaa
tttaagcaagcacttcaattatacaagggtgatgctgcaactgttataatggagattatt
gggaccattgaaggaggtccaccagtggatgtttcatctgttcgttccatgtatgagcat
ttggctcgaagtgcaccagccattttagatgattctctttctgctgattcctatctcaat
gtcttgtacatgccatccacatttccacggtcagagagattcagggattctcaagaagct
tcaaatgacaattctttcaacagtacacactttgaagatgaacctaggagcaacttggac
agtgttagatatattgaatgcatcagttatcttcaagaatatgctcgtcaacatatgctt
gatttcatgtttcgacatggccattacaaggatgcttgcttattatttttccctcccaat
tctgttcctccacctcctcaaccatcttcattgggcgttgtcacttcatcttcttcccct
caacgacaagatcctttggctactgattacgggacccttgatctattgtgtgatctgtgc
attgcttatggagccatgcctgttttggaggaagtactgtcaggaagaacttcaaatata
acatcagacgatcaatcagtgaaccaacatacaactgcagcactttctcgcatctgtaat
tattgcgaaactcacaagcatttcaattatttatacaagtttcaggtgataaagaaggat
catgtggccgctgggctttgttgtatacaattgtttatgaactcttcttctcaagaagaa
gctattagacacttggagaatgccaagatgcattttgaggaaggcttgtcagcgcgacat
aaggcagcagagtctactaagcttattaccaagggcatccgtggaaaaagtgcctctggg
aaactaactgaagaaggacttgtcaaattttctgctagagttgctattgagatagatgtt
gtcaaatgctttaatgatgcagaaggaccacagtggaaacattcactttttgggaatcca
aatgatcctgcaactttcaggaggaggtgtgaaattgcagagactcttgcggagaggaat
ttcgacttggcttttcaggtgattcatgagttcaatcttccagctgttgacatatatgct
ggtgttgctgcatcacttgctgagagaaagaggggaagccaactcacggagttctttagg
aacattaaaggcaccatcgatgatgatgattgggatcaggttttgggggcagccattaat
gtgtatgcaaacaaacacaaagagcgacctgaccgtctgattgacatgttgactagtagc
cacaggaaagtacttgcatgtgttgtctgcgggcgtctcaaaagtgcattccaaattgca
tctagaagtggaagtgtggcggatgttcaatatgttgcacatcaggcgttacatgctaat
gcacttccagttcttgatatgtgcaaacaatggctctctcagtacatgtag
DBGET
integrated database retrieval system
