Lycium barbarum (goji berry): 132635703
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Entry
132635703 CDS
T09483
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132635703
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
132635703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
DUF4143
Motif
Other DBs
NCBI-GeneID:
132635703
NCBI-ProteinID:
XP_060208187
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All DBs
Position
4:complement(28124569..28126957)
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AA seq
528 aa
AA seq
DB search
MENSPSCKNCDKTTIVPDDVTGNLVCTSCGVIQDFVNFDPQIGGISGIAGTYVKTGTSGT
GTLYNYKQTKIYLAQKIIEDLMYQLGFSSSKSSEVKLMVEKITDSEYGQGRWFSVLVGAC
AYVVMRQDVKPLAIVQVANLVGCDIYELGRMVYRVVDFLDLKLPGFDIVDSFEHYIRNSP
SFSEVSEDLIGRMLKQGVFLVQCLVKWYVTTGRRPLPVVVAVLVFVAQLNQIDDVTIEDI
ANELQVAAVTCKLRYKELLERLVKVARALPWGEDVTVKNIMKHASFVIQYMELKSMSKNS
NDKRKSFEDGGFDLDYLIDDCLSSGNDYGLDVNDTENNSQYFQMDHASSLSIESPNRFQI
SPECLAMIYSKIKNDMYVVESTDSRDNNIRKRKKSYDIFSYTDWWKGESEMSKKLLVKQI
VEKDVGLRAMPPSYDSGCLAYERRKEKIKAAKFRIHKTMYPSDAGSIDKIELGSLEHVNT
GKKRRRKTKVNVDWEDFVIETLLLHQVKEEEIEKGYYKTLLDLHVFNY
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcaccttcttgcaagaattgtgacaagacgacaatagttccagatgatgta
acaggtaatttagtctgtacatcatgtggggttattcaagattttgttaattttgatcct
caaattggtggtattagtggcatagctggaacatacgttaaaactggcacatcaggtact
ggaactctctataattacaaacaaacaaaaatttacctagcccagaaaataattgaagat
ttaatgtatcaattaggattttcttcctcaaaatctagtgaagttaaacttatggtagag
aaaattactgatagtgaatatggacagggtagatggttttcagtacttgttggtgcatgt
gcttatgttgtaatgaggcaagatgtaaagccattggctattgttcaagtagcaaatttg
gtggggtgtgatatttatgaattgggtagaatggtttatagggttgttgattttcttgat
ttgaagttgcctggattcgatattgtggattcgttcgagcattatattaggaattccccg
agttttagtgaggtttctgaggatttgattgggaggatgttgaagcagggtgtgtttttg
gtgcagtgtttggtgaagtggtatgttacgacgggaaggagaccgttgcctgtggtggtg
gcagtgttggtgtttgttgcacagttgaatcaaatcgatgatgtgacgattgaggatatt
gcgaacgagttacaagtggcagctgttacttgtaagttgagatataaggagcttttggag
aggctcgtgaaggttgctcgagctttgccttggggtgaggatgttactgtcaagaacatt
atgaagcacgcgtcgtttgttattcaatacatggagttgaagtcaatgtcaaagaatagt
aatgataaaaggaagagttttgaggatggtggatttgatctggattatttgattgatgat
tgtttgagcagcggaaatgattatggtttagatgttaatgacaccgaaaataactcacag
tactttcagatggatcatgcatcaagtttgagtattgaaagtccaaatagattccagata
tcgccggagtgtttggcaatgatttattcaaagattaagaatgatatgtatgtggtggag
tctacagatagcagagataataacattaggaaaaggaagaaaagttatgacatattttca
tacacagattggtggaagggcgaatcagaaatgagcaaaaagcttttagtgaagcaaata
gtggagaaagatgtgggattgcgtgctatgcctccttcttatgatagtggttgtttggca
tatgaaaggagaaaagagaagataaaggcagcaaagtttcgaatccataagacaatgtat
ccttcagatgctggttcaattgataagattgaattaggctcccttgaacatgtaaatact
ggaaagaaaaggagaaggaaaacgaaagttaatgttgattgggaggatttcgttattgaa
acccttctccttcatcaggtgaaagaagaggagatagagaagggctattataaaaccctg
ttggacttgcatgttttcaactattga
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