Lycium barbarum (goji berry): 132635781
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Entry
132635781 CDS
T09483
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00730
Thiamine metabolism
lbb00900
Terpenoid backbone biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
132635781
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132635781
Enzymes [BR:
lbb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
132635781
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_C_1
DUF1829
Motif
Other DBs
NCBI-GeneID:
132635781
NCBI-ProteinID:
XP_060208289
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All DBs
Position
4:complement(30845950..30860505)
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AA seq
704 aa
AA seq
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MVAVSAQYPCGICPHFNGNSKILSPETELCSLSFPSRVGYSRLNLSLKDHVAQVHSLPHA
GDFTGENEPTPVLDAIESPMNLKNLSTKELNQLADEVRSELSFIMAKAQRPSRSSLAVVE
LSVAIHHVFHAPVDKILWDVAEQTYAHKLLTGRRQVMQTLGEPTPDFESEFDPFKAGHGC
NSISAGLGMAVARDFKGKRDRVVAVINNETTMAGQVYEAMSNAGYLDSNMIVILNDSQHS
LHPKLEEASKTPINALSKTLSKLQSSKLFRRFRELAKVLTKKIGKGMYEWAAKVDEYARG
MIGPPGSTLFEELGLYYIGPVDGHNIEDLVSVLNEVASLDSMGPVLVHVITKEELQVADN
QMNANKIMEGASSSDTIPCGTRTYSDCFVEALISAAERHKDIVAVHAGMGMEPSLHLLKN
VFAEKFFDVGMAEQHAVTFAAGLARGGLKPFCIIPSAFLQRAYDQVIHDVDRQKVPVRFI
ITSAGLVGSDGPTQCGAFDIAFMSCLPNMIVMAPSDEVELSHMVATAALIDDRPVCFRYP
RGALSVMEQSFGSGIPIEEQVGKGRILREGKDIALLGYGSMVQNCLRAQSLLSKLGVEVT
VADARFCKPLDIKLLQDLCKSHSFLVTVEEGSIGGFASHVAQFLSLNGQLDAGIKWRPIT
LPDNYIEQASPKEQLAVAGLTGNHIAATALSLLGRTREALLLMC
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggttgctgttagtgctcagtacccatgtggcatctgccctcatttcaatggaaattca
aagatactttccccagaaactgagttatgtagtttgagttttccttctagagttggatat
tcaagattgaaccttagcttaaaggatcatgttgctcaagtacattctttaccacatgcc
ggtgatttcactggtgaaaatgagccaacaccagttcttgatgcaattgaaagtcccatg
aacctaaagaatttatcaactaaggaactgaatcaactagctgatgaagttcgatcggaa
ttatcgtttatcatggcaaaagctcaaagaccttccagatccagtctggctgtggtggag
ctgtctgttgctattcaccatgtatttcatgctcctgtggacaaaatattgtgggatgtg
gctgaacaaacatatgcacataaacttctcactggaaggaggcaagtaatgcaaacactt
ggagaaccaacaccagattttgagagtgaatttgaccccttcaaagcagggcatggttgc
aacagcatatctgctggacttggaatggctgttgcccgagattttaaggggaagcgtgat
cgtgtagtggcagtgatcaacaatgaaacaactatggccggccaagtttatgaggcaatg
agcaatgcaggctatttagactcaaatatgattgtgatattaaatgatagtcagcattct
ttacacccaaagcttgaggaggcatctaaaacacctattaatgctttgtcaaaaactctc
agcaagcttcagtcaagtaaactgttccggagatttagagaacttgctaaggtattgact
aagaaaattgggaaaggcatgtatgaatgggcagccaaggttgatgagtatgcacgcggt
atgattggcccgccaggatcaaccctttttgaagagcttggcctttactacattgggcct
gttgatggacacaatattgaagatctagtatctgttctgaatgaagtggcatctttggat
tcaatgggtcctgttttagttcatgttataaccaaggaagagctgcaagtagcagacaat
caaatgaatgcaaataaaattatggaaggtgcatcaagctcagacactattccgtgtggc
actcgaacatatagtgattgctttgtagaggccttgatatcagcggcagagagacacaaa
gatattgtagctgttcatgcaggcatgggaatggagccatcacttcacctgctgaagaat
gtctttgcagagaagttctttgatgttgggatggccgaacaacatgcggtgacatttgca
gctggattggcccgtggaggactgaaaccattctgcataattccttcagctttcctgcaa
agagcctatgaccaggtcatccatgatgtagatcgccagaaggttccggtgcgtttcatt
attacaagtgccggattagtaggatctgatggtcctacacaatgtggggcatttgatata
gcatttatgtcctgtttgccaaacatgattgtgatggctccttctgatgaagttgagctt
tctcatatggttgctactgccgcccttattgacgacaggcctgtttgcttccgctaccct
cggggcgccctttcagtgatggagcaatcatttggcagtggaattcccattgaggagcag
gttggcaaagggagaatacttagagagggtaaagacattgctttacttgggtatggctcc
atggtacaaaattgtctaagagctcaatctcttctttcaaagcttggtgttgaagttact
gtagctgatgcacgattctgcaagccgctcgacataaaacttcttcaggacttatgcaag
agccattcctttctagttacagtcgaggaaggctctataggaggatttgcatcacatgta
gcacagttcctctcactcaatggccagcttgatgcaggaattaagtggagaccaatcact
ttgccggataactatatcgagcaagcatcaccaaaggagcagcttgctgttgcagggttg
actggaaatcacatagctgcaactgcattgagtctgcttggccgtactcgagaagctctt
cttttgatgtgctaa
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