Lycium barbarum (goji berry): 132635818
Help
Entry
132635818 CDS
T09483
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132635818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132635818
03036 Chromosome and associated proteins [BR:
lbb03036
]
132635818
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132635818
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132635818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
132635818
NCBI-ProteinID:
XP_060208342
LinkDB
All DBs
Position
4:32798545..32812358
Genome browser
AA seq
707 aa
AA seq
DB search
MPGLTSSESDDLAIVPFSENQPVVIYPVRHGLKSPINRLSISWGCGNTLRVSAFPKPHGE
AGGGRVVEVKLSNSGDDEEVDAATCRRIAYSSVTPFALLQSRKHSGMSLDNPPYKADWWE
HVIEYSKEISSLLSDRKPPPRPIIEDPKSVVNEIAEPTCLKAAWELLEIFYVDKQSQSWI
PERLLDWLADYSSLFSGTLPTIHSKLVDFQQELVGVQVVEEDPNYWDAMSSALAVGWLEI
VVKLLRLHGSYRFDQLVSRETENGLVEAVAVLISKMPRMRPSLREENLGECCKTKPDFLK
AWEKWRAQISKLDCSSYWLQCDHQQTKEGLKNLIQIMLGNPSVLSNATFNWMELFISHFL
YVRPFTAGLESMHNLAQKCMQSKPVSSPHKLFGLILGILGENNEVVLAECSKSFGPWMMA
HAVELLTAGNTHAEILLHEEHSKLGGVSIEELHRLVYAQVLSSHALTWQIAPIYLTSCIK
QGIGLLENLLYKQPVHHSQILLKSIEICRLYELDTLSSNIMRIAGVHHWKHGRKGSGVFW
LQQARDEFRLSRIAKQLFDFVGKSVSDEGFKQWEGLIELLGSESRTAGGLEFLNKYRNFR
RSLLQVHGDAPTDAARNASEALVSLMKNPSTPQRFWLPLLYDSLKLLNWHERLLLNVSQT
QLLLNKLQELSMARLRPDFVEADLPSDALSSVRLALATNLGRAILEE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccagggctgacgtcatcagaatccgatgacctggcaatagttccattctcagaaaat
cagccagtagtgatctaccctgtccgtcacggcctgaaatccccaattaatcgactctcc
atttcatgggggtgtggcaatactctccgtgtctcagctttccccaaaccgcacggtgag
gctggtggtggtagagtggtggaggtgaagctgagtaatagcggagatgatgaggaagtt
gatgctgctacatgcaggagaattgcttacagttcggtcactcctttcgcgcttcttcag
agcaggaaacattctggaatgtccttggataatcctccttacaaggctgactggtgggag
catgtcatagagtacagcaaagagataagttcactgctcagtgatcgaaaaccgcctcct
agaccaattattgaagatcccaagtcggtagtaaatgaaattgcagagccaacgtgtctg
aaagcggcgtgggagctattggagatattttacgtagacaagcaatctcaatcttggatt
cctgaacggttgctagattggttggctgactacagttctttattctcgggaactttacca
actattcattcaaagcttgtggattttcagcaggaacttgttggtgtacaggttgttgaa
gaagatcctaactactgggacgcgatgtcatcagcgttggccgttggctggctggaaatt
gtggtaaaattgttgcgcttgcatggctcttaccggtttgatcaattagttagccgagag
acagagaatggattggttgaagcagttgctgttcttatatccaagatgcctagaatgcgt
cctagtctgagagaagaaaatttgggcgagtgttgcaaaaccaagcctgacttcttgaag
gcatgggagaagtggagggcacaaataagtaaactggactgcagttcctattggcttcaa
tgtgatcaccagcagactaaagaagggctaaaaaatttgatccagatcatgttgggaaat
cctagtgttctatcaaatgcaactttcaactggatggagctttttatatcccatttctta
tacgttaggccatttactgcgggtctagagagcatgcacaatttagctcagaagtgcatg
caatcaaagccagtttccagcccccataagctgtttggtcttatacttggaattcttgga
gaaaataatgaggttgttctagcagagtgctcaaaatcatttggcccctggatgatggcg
catgccgtagagttgttgacagctgggaacactcatgcagaaattcttttgcatgaagag
cattccaaactggggggagttagcatagaagagctgcatagacttgtatatgcacaagtt
ctgtcttctcatgcattgacatggcaaattgcaccaatatacttgacttcatgcataaaa
caagggattggattactggagaatttgctgtacaagcagcctgtacatcatagtcaaatt
ctgttaaagagtatagagatctgccgtctgtatgaacttgacaccctaagttcaaacatt
atgaggattgctggggtgcatcactggaaacatgggagaaaaggctctggtgtcttttgg
ctgcagcaagctcgagatgaatttcgtttaagcagaattgccaagcaattatttgatttc
gtggggaagtcggtttctgatgaaggattcaagcaatgggaaggtctcatagagttgctg
ggttccgagtctagaactgctggcggtcttgagtttctgaacaaatacaggaattttagg
agatccctgctgcaggttcacggtgatgcacccacagatgctgctcgtaacgcatctgaa
gctcttgtctctctcatgaaaaatccttccacgccgcaacgcttttggttacctcttcta
tatgattcattgaaattgttaaactggcacgagcgactgttgcttaatgtttctcaaact
cagcttctcttgaataaactgcaagagttgtccatggcaagattgaggccagactttgtt
gaagctgacttgccatctgacgccttaagctctgtcaggctggcacttgccactaacctg
ggtcgtgcaatccttgaagagtga
DBGET
integrated database retrieval system
