Lycium barbarum (goji berry): 132635844
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Entry
132635844 CDS
T09483
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132635844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132635844
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
132635844
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
132635844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
132635844
NCBI-ProteinID:
XP_060208394
LinkDB
All DBs
Position
4:complement(34389033..34401207)
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AA seq
769 aa
AA seq
DB search
MVGSESLTPPPPPPADAAAKKYGVTKPLSLAGPTDTDLLRNQALEKFLKDSELYESEEET
ARREEVLRQLDQIVKSWVKELTRQRGYTDQMVEDANAIIFTFGSYRLGVHGPGADIDTLC
VGPSYVNRDEDFFIILHDILAEKEEVSELQPVPDAHVPVMKFKFQGISVDLLYASISLLV
VREDLDISDRSVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKKRGVY
SNVTGFLGGVNWALLVARICQFYPNALPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGF
LVWDPRKNPKDRTHHMPIITPAYPCMNSSYNVSPSTLRVMMDQFQFGNKICEEIELNKAQ
WAALFEHYLFFEVYKNYLQVDIIAADNDDLLAWKGWVESRFRQLTLKIERDTNGMLQCHP
YPNEFVDLSKSCPHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFKQDVSMYAYWRPGMDI
YVSHVRRRQIPPFVFPDGYRRPRQSRNTSHITPEKVAKGCRSPDERHPKRKQEADTVHVY
SGKPGKRASISPQRVGSVSPLGGSCWSDGSSQIIVSDESQRELESSCLLGSRNDASLSDS
SICTPDSLNYTMSRGSTLSGVSREIDLDSSNTKSFPSKEVLSQCEDICARDVQTFQVLQN
DEKGEILGSLHQDNEPCIQTGSAESSERVPVSNSNIQNLTCEGDMSLTDQISQLGDGCLS
GNGVLGNGLAEKSQPNHSLARAMEPQDGASPEAVQEAAIRHVFLRTCVL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttcggagagcttaacgccgccgccgccgccgccggcagatgcggcggcgaag
aagtatggtgtgactaagcctttgtctcttgctggccccaccgacactgatcttctaaga
aatcaggccttagaaaagtttttgaaggactcagagttgtatgagagcgaggaagagaca
gcaaggagagaagaagtgttgcgtcagcttgatcagattgtaaaatcatgggttaaagaa
ttgactcgccagagaggctacactgatcaaatggtggaggatgcaaatgctatcatattc
acttttggttcttatcggctaggagttcatgggcctggagctgacatagatacattgtgt
gttggtccctcttatgtcaatcgtgatgaagatttctttatcattttgcatgatattttg
gctgaaaaggaagaagttagtgaacttcaaccagttcctgatgcccatgtcccagttatg
aaattcaaatttcaaggaatatctgttgatctcctttatgcaagcatatctcttttagtt
gtccgtgaagatttagatatctcagatcgttctgtactgtacaatgtggatgaaccaacc
gttcgaagtctcaatgggtgccgggttgccgatcaaatactgaaactagttcctaatgcg
gagcacttccgcacaactcttagatgtttaaagttttgggcaaaaaagcgcggtgtttat
tccaatgttaccggattccttggcggtgtgaattgggctcttttggttgctcgcatttgc
caattttatcctaatgcactcccaagtatgcttgtttctaggttcttcagagtttataca
caatggcgttggccaaatccagtgatgctatgcccaatagaagaggatgagcttggtttt
cttgtttgggatcctcgcaagaatccaaaagaccgaacccatcatatgccaattatcacc
cctgcttacccttgcatgaactctagctacaatgtctcaccaagtactcttcgagtaatg
atggaccaatttcagtttggtaacaaaatttgtgaggagatagagttgaataaagcacag
tgggccgcgctttttgagcattatcttttctttgaggtctacaaaaattatctgcaggtt
gacattatagcagccgataatgatgatttgctagcttggaaaggctgggtggaatcccgg
tttcgacaactaacacttaagatagaacgggacacgaacgggatgttgcagtgccatccg
tatcctaatgaatttgtagacttatctaagtcatgcccacattgtgctttttttatgggc
ttgcagaggaaacagggtgtcaaagtgcaagaaggacaacagtttgatattcgtggcaca
gtcgatgagtttaagcaagacgtaagcatgtacgcttattggagaccaggcatggatatc
tatgtatctcatgttcggaggaggcaaattcctccttttgtctttccagatggatatagg
agaccgcgacaatctaggaacacaagtcatattactcctgagaaagttgctaaaggctgc
aggtctcctgatgaaaggcatccaaagaggaagcaggaggctgacacagttcatgtatat
tcgggcaaaccaggaaaacgtgcttctatcagtccgcagagggtaggatctgtttctcct
ttaggtggttcttgttggtctgatggatcatcacagataatcgtttctgatgagtcacag
agggagcttgagagttcttgcctactgggcagcagaaacgatgcctctctgagtgacagt
tccatttgtacacctgatagtttaaattatacaatgtcaaggggttccactttatccgga
gtttccagagaaattgatttagatagttctaacacaaaatccttcccaagcaaggaggtg
ctcagtcagtgtgaagacatatgcgctagagacgtccagacttttcaagtcttgcagaat
gatgagaagggggagattttgggatcacttcatcaggataatgaaccatgcattcagact
ggtagtgcagaaagttcggaaagagtgcctgtatcaaattccaacattcagaacctcact
tgcgagggtgatatgagcttgaccgatcagatttcgcaactaggggatggatgtttaagt
gggaatggagtattgggtaatggcttggccgagaagtctcagccaaaccattctctcgca
agggcaatggaaccgcaggatggagcaagcccagaggctgtgcaagaggctgcaataagg
catgtgtttctgaggacctgtgttttatga
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