Lycium barbarum (goji berry): 132636195
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Entry
132636195 CDS
T09483
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132636195
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132636195
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132636195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_DUS3L
zf-RING_2
zf-CCCH_3
zf-C3HC4
zf-RING_5
zf-CCCH_RBM22
RING_XB3-XBAT31
zf-CCCH_9
zf-rbx1
zf-CCCH_PARP12
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
132636195
NCBI-ProteinID:
XP_060208900
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All DBs
Position
4:complement(107365212..107392349)
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AA seq
352 aa
AA seq
DB search
MNRVLCKFFAHGACLKGDHCEFSHDWNNPSNNVCTHYQKGACAYGSRCRYEHVKLSRSQP
SAQSSAQPQQYLLSSSAPSNVPPGTGTHNTDVVPSISTEYLASSRPAWNQKSELQDTLEI
DDMIELKSVNPADRSICAFAAAGNCPRGEKCPHIHGDLCPTCGKHCLHPFRPQEREEHIK
TCENKQKHLDLLKRSQEIECSVCLERVLSKSTAAERKFGILSECDHPFCVSCIRNWRGSS
SSGMDVNSALRACPICRKLSYFVIPSVIWYFTKEEKDEIVDNYKNKLRSIDCKHFDFGNG
TCPFGTSCFYKHQYRDGRLEEVVLRHLGSEDGSTVIAKNIRLSDFLRNLEIR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacagggttctttgcaagttttttgcacatggggcatgtctgaagggggatcattgt
gagttttcacatgattggaacaatccttctaataatgtatgcacccactaccaaaaagga
gcttgtgcttatggaagccggtgtagatatgagcatgttaaactgtctcgatcacaacct
tcagctcaatcttcagcacaacctcaacaatatctgctttcaagttctgctccttccaat
gtgcctcctggaacgggtacacataatacagatgttgtaccaagtatttctactgagtat
ttagcttcaagcagaccagcatggaaccaaaagtcagagcttcaagatacattggagatt
gatgacatgattgagttgaagagtgttaatccagctgataggtcaatctgtgcttttgct
gctgctggtaattgtcctcggggagaaaagtgtcctcatattcatggagatctgtgtcca
acctgtgggaagcattgcttgcatcctttcaggcctcaggaaagagaggagcatataaaa
acatgtgagaacaagcaaaaacaccttgatttattgaagcgcagtcaagaaatagaatgc
agtgtatgccttgaacgtgttctttccaagtcaacagcggctgagaggaagtttgggatc
ctttctgagtgtgatcatccattttgtgtatcgtgtatcaggaattggcgtggcagttct
tcctctgggatggatgttaattctgcactgagggcttgccccatatgccgaaagctttca
tattttgtcattccaagtgttatttggtacttcacaaaagaagaaaaggacgaaatagtc
gacaactataaaaacaaactcagatctatcgactgcaagcactttgactttgggaatggg
acttgtccatttgggaccagctgtttctacaagcatcaataccgtgatggtcgtttagag
gaagtagtactacgccatcttggttctgaagatggaagcacagtaatcgctaaaaatatc
aggctctcggacttccttaggaatttggaaattaggtga
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