KEGG   Lycium barbarum (goji berry): 132636430
Entry
132636430         CDS       T09483                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132636430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbb03019]
    132636430
   03041 Spliceosome [BR:lbb03041]
    132636430
Messenger RNA biogenesis [BR:lbb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     132636430
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     132636430
Spliceosome [BR:lbb03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    132636430
SSDB
Motif
Pfam: RRM_1 RRM_7 PHM7_cyt
Other DBs
NCBI-GeneID: 132636430
NCBI-ProteinID: XP_060209267
LinkDB
Position
4:128732445..128737934
AA seq 461 aa
MDLMKKRKLDDNNNGVIVSDIPVTVTHNFTIEDAKKLLEPLTSEQTLEILQNAVIHHNDI
LDAVRLIADRDTTQRKLFIRGLGWETTTDKLRGVFGNYGELEEAIVILDKATGKSKGYGF
VTFKHVDSAIIALKEPSKKIDGRITVTQLASAGIQGGPGGGNLGNSVDVSLRKIYVANVP
YDMQSERILQHFSMYGEIEEGPLGFDKATGKSKGYALFVYKTVEAARAALVDSVKNIDGH
VLNCKLAIDGKKGKPGVVGTVAGQVQTDGHGDPMGPGPVQYGVPPPSGGVTGYGGYSGLS
SYSGHGHGPNPALGSGNGIGVGVGGSSFGSQPPISGGGYGSGIGGGPYGGGSHYGGPGSA
GYGGLTGSASGVGGGFGSAGAVGGAAGALGGGGGRGSSMYGLPPPSSTGLPSAGDYPPQG
SHYGSLHQPHALQNQAPGPGASGAPRVPPGGGMYQGMHSYY
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggacctaatgaagaagagaaagcttgacgacaacaacaacggcgttatcgtatccgat
atccctgtgacggttacccataactttacaatcgaagacgcaaagaagcttctagaacct
ctcacatccgaacaaaccctagaaatccttcaaaacgccgttattcatcacaacgacata
ttagacgccgttagattaatcgccgatcgtgacacaacacagagaaaactcttcatacgt
ggattagggtgggaaacaacaacagataaacttcgtggtgtttttggtaattacggtgag
ttagaagaagctattgtaattcttgataaagctactggtaaatctaaaggttacggtttc
gttacgtttaaacatgttgatagcgcgattatcgcgttaaaggagcctagtaaaaaaatt
gatggtagaattactgttactcaattagctagtgctgggatacaaggtgggccaggtggg
ggtaatttaggtaattcggttgatgtatcgttaaggaagatttatgtagctaatgtgcct
tatgatatgcaaagtgagaggattttacagcatttttcgatgtatggtgagattgaggaa
gggccgttaggttttgataaggcgactgggaagtcgaaaggttatgctttgtttgtttat
aagacggttgaggctgctagagccgcgttggttgatagtgttaagaatattgatggacat
gtgttgaattgtaagttggctatagatgggaagaaagggaagcccggggttgtgggtacg
gttgcgggtcaggtacaaacggacgggcatggtgatccgatgggtcccggtccggtacaa
tatggtgtgccgccgcctagtggtggggttacgggttatggtggatattcggggctttcg
tcgtatagtgggcatggacatggtccgaatccggcattgggtagtggaaacggtatcggt
gttggtgtgggtggttcgtcgtttgggagccaaccacctattagtggtggtgggtatggt
tcggggattggtggtggtccgtatggtggggggtctcattatggtgggccgggttcagct
ggatatggcgggttgaccggtagtgcaagcggtgtgggtggtggttttggcagtgctggg
gcggtgggaggtgctgctggtgcattaggtggtggtggtggtcgtggatcttcgatgtat
gggttaccacccccaagctcaactgggttgccttcggcgggagattatccaccacagggt
tctcattacggttctttacatcaacctcacgcgctacaaaaccaagctcccggtcccggg
gcatcaggtgcgcctagagttccacctgggggtggtatgtaccaggggatgcattcatac
tactga

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