Lycium barbarum (goji berry): 132636433
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Entry
132636433 CDS
T09483
Name
(RefSeq) tRNA dimethylallyltransferase 9
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00908
Zeatin biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00908 Zeatin biosynthesis
132636433
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lbb01006
]
132636433
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132636433
Enzymes [BR:
lbb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
132636433
Prenyltransferases [BR:
lbb01006
]
Compound prenylation
tRNA dimethylallyltransferase
132636433
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
132636433
Prokaryotic type
132636433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
AAA_22
AAA_18
AAA_16
nSTAND3
Cytidylate_kin
AAA_33
Hpr_kinase_C
AAA_28
PPV_E1_C
Zeta_toxin
RNA_helicase
ABC_tran
AAA
ATPase_2
EF-hand_FSTL1
ResIII
TsaE
IstB_IS21
AAA_5
Rad17
RsgA_GTPase
NPHP3_N
AAA_14
SLFN-g3_helicase
Adeno_IVa2
PhoH
AAA_25
TIP49
Motif
Other DBs
NCBI-GeneID:
132636433
NCBI-ProteinID:
XP_060209283
LinkDB
All DBs
Position
4:128952108..128962632
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AA seq
463 aa
AA seq
DB search
MISTAGTGGVRISSYLRHPHRAETILLLPDVHFLRCRRCNHRLFSSCSATKKDKVIVISG
PTGAGKSKLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLGERKEVVHHLVDILHPSE
DYSVGQFFEDARQTTRDILDRGRVPIVAGGTGLYLRWFIYGKPDVPKASREISAEVYSEL
ANLQNDYDWDAAVQLLVKAGDPGALSLAANDWYRLRRRLEIIKSTGSPPSAFEVPYNSFR
EQLDSGATDAADVKSFADRLQQSEIKDLEYDFLCYFLSTDRLDLYRSIDFRCEDMLLGTD
GILSEARWLLDLGLLPNSNSATRAIGYRQAMEYLLRCRENGGWSSAGDFYRFLSEFQKAS
RNFAKRQMTWFRNEQIYEWIDASKPLEKVLNFICDSYNSQDSHLQMPESLRMRKEIRNAR
QVAELKAYRTRNRHFIGREDCVDVLDWIKKSYGEATVSSLTNN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgataagcaccgctgggacaggaggcgttcgaattagcagttatctccggcatccccac
agggcggagacgattctccttcttcccgacgtacattttttgcgctgccgccgctgcaac
caccgcctcttcagctcctgctctgccaccaagaaggacaaagttattgtaatttctgga
cctaccggtgccggcaaaagcaaactagcattagagcttgccaagagactcaatggtgaa
atcattagcgctgactctgttcaggtgtatcgagggcttgatgttggttcagcgaaacct
tcccttggtgaaagaaaggaagtggtacatcatctggttgacatattgcatccatccgaa
gattattcagttggacaattttttgaggatgcaagacaaactaccagagatatcctagat
aggggccgtgttccaatagtcgcgggtggtactggattatatttgcggtggtttatttat
gggaagccagatgttccaaaagcctcgagggagattagtgctgaagtctattcagagctt
gcaaacttacagaatgattatgactgggatgctgctgttcagttgttggttaaagctggt
gatcctggagccctgtctttagcggcaaatgattggtaccgcttgcgtcgcaggcttgaa
attattaagtctactgggtcacctccatcggcttttgaagtaccatataattctttcaga
gaacagcttgattcaggtgcaacagatgctgccgatgtcaagagttttgctgacagattg
cagcaaagtgaaataaaggatttggagtatgattttctttgttatttcctttccaccgat
aggctggatctctatagatcaattgatttccggtgtgaggatatgctcttaggaacagat
ggaattctatctgaggcaaggtggcttcttgatttgggtcttttgccgaactctaattct
gctactcgagcaattggttaccgacaagcaatggaataccttctaagatgtagagaaaat
ggaggatggagttctgctggtgacttctatagatttttatctgaattccagaaagcatca
cgaaactttgcaaaaaggcagatgacatggtttcgcaatgaacagatttatgagtggata
gatgcttctaaacctttggaaaaggtgcttaacttcatatgtgattcatataacagtcag
gatagccatctccagatgcctgagtcacttcgtatgaggaaagagataagaaacgcccgt
caagttgcagaattgaaggcctatcgtacaagaaacaggcatttcattgggcgtgaggat
tgtgtggatgttctagactggataaagaaaagttatggagaagccactgtctcttcgtta
accaacaattaa
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