Lycium barbarum (goji berry): 132636450
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Entry
132636450 CDS
T09483
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132636450
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132636450
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132636450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
zinc_ribbon_16
PHD_NSD
zf-RING_Vps41
zf-C3H2C3
PHD
Motif
Other DBs
NCBI-GeneID:
132636450
NCBI-ProteinID:
XP_060209306
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All DBs
Position
4:complement(129719240..129728534)
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AA seq
522 aa
AA seq
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MSHGNRIIDLEADQPGQEFFHSAPCMFYAQPNVHAVAAPGNVGNIYLHHVSDHQEGTLTY
GLTQYNGVQHQHPPTNPDLAISASSNHYNPYMAVPSASGDFPFPVNHGPHGMNSDYGRNN
HYMDDVRGSFKRKNAEGIPANLQYHHALAGSSSAVAPVIARAHESDISMDATSFTPPDYG
GNSSSFIEDGAPRNMSNRSGASGTENVARRNLNNQLFQGNYISQTHQLPGNPWLDLQFNG
NGSETQTWAWNQAAPLPYVPGGIGGCVDAGNMGVRGYPMTSSNGGLTSFLYPPVPQGHPG
LHHMPPNIQGMRGQPITFPPQMTASSSHRHLPNPSNITTNLMQGVVEAGPRYMPSLPTGF
GLYRPHQRAIVLERNARHRNLPNMRVLPEDGVAMLDVSGYHEVNNPTDQHRDMRLDIDHM
SYEELLALGEQIGSVTTGLSDEIIVSRLKTRSFSSPEIPCTLETAACLDHKTDFCVICQT
DYNNQETIGTLDCGHEYHADCVKKWLVVKNICPICKSTGLST
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacggtaatcgtataattgatttggaagcagatcagccaggtcaagagtttttt
cattctgcgccttgcatgttttatgcacagcctaatgtccatgcagtagcagctcctgga
aatgttggtaatatctatttgcaccatgtatcagaccatcaagagggtaccttaacatat
gggttgacacagtacaatggggttcaacatcagcatcctcccaccaatcctgacctagcc
atttctgcttcatccaatcattacaatccgtacatggctgttccttccgcttctggagat
ttcccatttccagtaaatcatgggccacatggaatgaattcagactatggaaggaacaat
cattacatggacgatgtcagaggctcatttaagagaaagaatgctgaaggaattcctgca
aatcttcaatatcatcatgctttggcaggttccagctctgctgttgctccagtgattgca
agggcacatgaatctgatatttcgatggatgctacgtcatttacaccaccagattatgga
ggcaattcatcatcattcattgaagatggagcaccgagaaatatgagtaacagatctggt
gctagtggtacagaaaatgttgcacgacgtaaccttaataatcagttatttcaaggaaac
tatataagtcagacccatcagttgcctggcaatccttggttggacttgcagttcaacggc
aatggtagtgagactcaaacttgggcctggaatcaggctgctcctttaccctatgtacct
ggaggcattggaggctgcgtagatgctggaaacatgggcgtgcgaggttatccaatgaca
tctagcaatggaggtttgactagttttctgtatccacctgttcctcaagggcacccaggc
cttcatcatatgccacctaatattcaaggaatgagaggccagcctatcaccttccctcca
caaatgacggcatcatcctcacaccgacacctacctaatccgtccaacatcaccactaac
ctaatgcaaggcgttgtagaggctggacccagatatatgccctccctaccaactggcttt
gggttgtacagacctcatcaaagggctatcgtacttgaaagaaatgcgagacatcggaac
cttcctaacatgagagttctgccagaagatggagtggcaatgctggatgtttcaggctac
catgaagttaacaatcccactgatcagcacagagatatgcgtttggacatagatcacatg
tcctacgaggagcttcttgcactgggggagcagattggcagtgtaacaactgggttgtca
gatgaaataattgttagccgtttgaaaacaagatcattttcctcccccgagattccttgc
accctggaaactgctgcatgtttggatcacaaaaccgatttctgtgtcatatgccagact
gattacaacaaccaagaaactataggaactcttgattgcgggcatgaatatcacgcagat
tgtgtaaagaagtggttggttgtgaagaacatttgccccatctgcaaatccacaggattg
tcaacataa
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