Lycium barbarum (goji berry): 132636557
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Entry
132636557 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132636557 isoform X1
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132636557
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
132636557
TFIIIC, fungi type
132636557
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Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
TFIIF_beta
GCN5L1
Motif
Other DBs
NCBI-GeneID:
132636557
NCBI-ProteinID:
XP_060209461
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Position
4:complement(133528144..133552544)
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AA seq
599 aa
AA seq
DB search
MGVINDGSVSGNLPTNKVFAVHYPAYPSSVERAVETLGGIQGIVKARTSQSNKLELHFRP
EDPFSHPAFGELNHSNNFLLKISKCKVRDVQTVDSSCGILIQSSSSPVNCEENSSVENSL
AAQKVNESRCLNDSASKEIEVQTATNLQEHLSANIVSHVSEAYHFNGMVDYQHVLAVHAD
VARRKKRQWAEVEPKFEKGGLMDVDQEDLMILLPPLFSTKDTPDNIVLKPCASVGSKRKQ
EGRHNWEREMEPSLAIDFTIKEIPKPVDWEKYVPQGSDRWRWQKAVCELFEERKIWAKES
LAERLRDKGLKFRESMLKRLLCGVAYYFLNGPFRRFWIRKGYDPRKDPESRIYQNIDFRV
HHELRSYCESRASSGLQHRWDDICAFRVFPCKCQIPLQLCELKDDYIQEEIRKPSKEETC
DSTTGWFSAHTLDCLRRCIDVRFMSVCPHPRAESLLNSVSARFEKSKRIHTYVKVARPEE
HEKANKVENNEVDEQAETHEVDEPDDLEDFEDEFEDDNVEEEIDAYDPLDLAVEEGDGSL
HDDPHSNHDNVSRDFLQELFGNFPFSTAGVDEVQDDQSLGEYQIYDEYNDASYSEDEDY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgggggttataaacgacggttcagtatcaggaaatttacccactaacaaggtctttgct
gttcattaccctgcttacccttcttcagtcgaacgtgctgttgagactcttggcggcatt
caaggcattgtcaaggctcgcacttcacagtcaaataagctggagctccatttccggcca
gaagatcctttttcacacccagccttcggggagcttaaccatagcaataacttcttgttg
aaaatatccaagtgtaaagtaagggatgtccaaactgttgacagtagctgtggaatattg
atacaatcttctagtagtcctgttaattgtgaagaaaattcttctgttgaaaattcttta
gctgcacaaaaggtgaatgagtctagatgtttaaatgatagcgcttcgaaagaaattgaa
gtgcagacagctactaatttgcaggagcatctctcagctaatattgtttctcatgtttct
gaagcttatcattttaatggaatggtagactatcagcatgttctcgctgttcacgctgat
gttgcgagaagaaaaaagagacagtgggcagaggtggaacctaaatttgagaagggaggt
cttatggatgtcgatcaggaggatttaatgattttactacctcctctgttctccacaaaa
gatacgcctgataatattgtattaaaaccttgtgcaagtgtgggctcaaaaagaaaacaa
gagggacggcacaattgggagagggagatggagccaagtcttgccattgattttactatc
aaagagattccgaagccagtggattgggaaaagtacgttcctcagggctcagatcgttgg
agatggcagaaggcggtatgtgaattgtttgaagagcgtaaaatatgggccaaagagtct
ttggctgagcgcttgcgtgataagggtctgaaatttcgagagagcatgctcaaaaggctt
ctttgtggagtagcatattactttttgaatgggcctttccgtagattctggataagaaaa
ggttatgatcctcggaaggatcctgaatcccgcatataccagaatattgatttccgagtg
caccatgaattacgaagctactgtgagagccgtgcgtcatctggattgcaacatagatgg
gatgatatatgtgccttccgtgtttttccatgtaaatgtcagataccattgcagctttgt
gaactgaaggatgactacattcaagaagaaatcagaaaaccttcgaaggaagaaacttgc
gatagtacaacaggatggttctccgctcatactcttgattgtttgagacgctgtattgat
gtgagatttatgtcagtatgccctcatccccgtgctgagtctttactaaactccgtgtct
gctcgcttcgaaaagtcaaagaggattcacacttatgtgaaagttgcaagacctgaagag
catgaaaaagccaataaagtggaaaacaatgaagtcgatgaacaagcagaaacccatgaa
gttgatgaacctgatgatttagaagattttgaagatgagtttgaggatgataatgttgaa
gaggagattgatgcatatgaccctcttgacctcgctgtcgaggaaggggatggctctcta
catgatgatccacattcaaaccacgataatgtttccagagatttcttgcaagagctcttt
ggcaattttccattcagtacagcgggggtggatgaagtgcaagatgatcagagtcttgga
gaatatcagatatatgacgaatacaacgatgcttcttattccgaagacgaagactactaa
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