Lycium barbarum (goji berry): 132636643
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Entry
132636643 CDS
T09483
Name
(RefSeq) aconitate hydratase, cytoplasmic isoform X1
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00020
Citrate cycle (TCA cycle)
lbb00630
Glyoxylate and dicarboxylate metabolism
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
lbb01200
Carbon metabolism
lbb01210
2-Oxocarboxylic acid metabolism
lbb01230
Biosynthesis of amino acids
Module
lbb_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
lbb_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
132636643
00630 Glyoxylate and dicarboxylate metabolism
132636643
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
132636643
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
132636643
NCBI-ProteinID:
XP_060209582
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Position
4:complement(139226494..139236921)
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AA seq
968 aa
AA seq
DB search
MLISSCVVNKPTYFSSVTKTLSSSSYRPSGSTRLRIRQSSFRSLTWSHGVNWKSQIRTSV
TPLLNRKLSTMASENPFNGILTSLPKPGGGEFGKYYSLPALNDPRIDKLPYSIRILLESA
IRNCDNFQVTKEDVEKIIDWENTSPKLAEIPFKPARVLLQDFTGVPAVVDLACMRDAMNK
LGSDADKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFRN
MLVVPPGSGIVHQVNLEYLGRVVFNREGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEA
EATMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGDGMA
ELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEAYLRANNMFVDY
NEPQHEKVYSACLSLDLADVEPCVSGPKRPHDRVPLKEMKSDWHSCLDNKVGFKGFAVPK
DVQEKVVKFSFHGQDAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKACDLGLHVKPW
VKTSLAPGSGVVTKYLLQSGLQTYLNQQGFNIVGYGCTTCIGNSGDLDESVSSAITENDI
VAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGVGKDGKDVYF
RDIWPSTEEIAEAVQSSVLPDMFKSTYEAITKGNNMWNQLSVPEAKLYSWDPTSTYIHEP
PYFKDMTMDPPGPAGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLNERGVDRRDF
NSYGSRRGNDEIMARGTFANIRIVNKLLNGEVGPKTIHIPSGEKLSVFDAAMKYKSAGQA
TIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDAE
TLGLTGHERYTIDLPDKISEIRPGQDVTVQTDTGKSFTCVVRFDTEVELAYFNHGGILPY
VIRQLSQQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcttcttgtgttgtcaacaagccaacatatttctcttcagttactaaaact
ctttcttcatcctcttatcgccccagtgggtccactcgtttacgtatacgtcagtcttct
ttccgatcgctgacgtggagccacggtgttaattggaaatctcagatcagaacaagtgta
acacctcttctcaatcgaaaactctctaccatggcttcagagaacccattcaatggaatc
ctcactagtcttcccaagcctggaggtggtgaatttggaaagtactatagccttcctgca
ctgaatgatccgcgaattgacaagctgccatattctattagaattcttcttgaatcagca
atccgtaattgtgacaactttcaagtcacaaaggaagatgttgagaagatcattgactgg
gaaaatacttcaccgaagctagcggagataccttttaagccagcccgagtcttgctgcaa
gattttactggtgtaccagctgttgtagaccttgcttgcatgcgcgatgccatgaacaag
cttggcagcgatgctgacaagattaatccattggtgccggtagatctagtaattgatcat
tcagttcaagttgacgtggcaaggtcagaaaatgcagtccaagctaatatggaacttgaa
ttccagaggaacaaggagagattcgcctttcttaagtggggttctaatgcttttcgcaac
atgcttgttgttccaccaggttctggtattgtgcatcaggtgaatcttgaatacctcgga
agagtcgtctttaacagggaaggtttgctctatcctgatagtgttgtcggaacagattcc
cacaccactatgatcgatgggcttggagttgctggctggggtgttggaggtattgaagca
gaagctacaatgcttggtcagccaatgagcatggtcttgcctggagttgttgggttcaag
ttatctgggaaattgcgcaatggtgtaactgccactgacttggtcttgacagtcactcag
atgctgaggaagcatggtgttgttggaaagtttgttgaattctatggtgatggaatggct
gaactatcattggctgaccgggccaccattgcaaacatgtctcctgaatatggtgctaca
atgggtttcttccctgtagatcatgttaccttgcagtatctgaaattaacagggagaagt
gacgaaacagtggcaatggttgaagcatatttgcgcgcaaataatatgtttgtcgactat
aatgagcctcaacatgagaaagtttactctgcttgcttgtccctagaccttgccgacgtc
gagccatgtgtgtcagggccaaaaagacctcatgaccgtgtgcctttgaaagagatgaag
tctgattggcactcttgccttgataacaaggttggattcaagggatttgctgtgccaaaa
gatgtgcaggaaaaagtggtaaaattttctttccacggacaagatgcagagctcaagcat
ggaagtgttgttattgctgctatcacaagttgcactaatacatcaaaccccagtgttatg
ctaggagcagcccttgttgcaaaaaaggcttgtgacctgggtctacatgttaagccatgg
gttaaaacaagtcttgctcctggctccggcgtagttacaaaatatttacttcagagtggg
ctgcagacgtacttaaatcagcaaggtttcaatattgttggatatggctgcacaacttgt
attgggaattctggggatttagatgaatcagtctcttctgctataacagaaaatgacatt
gttgctgctgctgtactctctggaaatcggaactttgagggacgtgttcatcccttgacg
agagcaaactaccttgcttcacctcctttagtggttgcctatgctcttgctggcactgtt
gatatagactttgagaaagagccaattggagtgggaaaggatggtaaggatgtctacttc
agggatatttggccatcaactgaagaaattgctgaggctgtccaatcaagtgtattgcca
gacatgttcaaaagtacctatgaagctattacaaagggaaacaatatgtggaatcaatta
tcagtaccagaagccaagctctactcatgggaccctacttctacgtacattcatgagcca
ccatatttcaaggatatgactatggatcccccggggcctgctggagtgaaggatgcttac
tgcttgctgaactttggtgatagtattaccacggatcacatttcgccagctggaagcatc
cataaagatagccctgctgctaagtacctcaatgagcggggggttgatcgcagggacttc
aactcatatggtagccgtcgtggtaatgatgaaattatggctaggggtacttttgccaac
atccgaattgtaaataagctgttaaatggggaagttggcccaaagacaattcacattccc
tcaggagagaaactgtctgtgtttgatgctgcaatgaaatacaagtctgctgggcaagcc
actataatcttagctggagctgaatatggaagtggaagctcccgagattgggctgctaag
ggccccatgttgttgggagttaaagctgtaattgctaaaagctttgagaggattcaccgt
agcaacttggtaggaatgggaattgtgccactatgtttcaaggctggtgaggatgcagaa
acacttggattgacaggtcatgagcgatatactattgatctcccagacaaaattagcgag
atccgcccaggtcaagatgttactgtacaaacagacactggaaaatctttcacatgcgta
gtccgctttgacactgaggtcgagttggcttatttcaaccatggaggtatcctcccatac
gtcattcgacagttgagtcagcaatga
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