Lycium barbarum (goji berry): 132636653
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Entry
132636653 CDS
T09483
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132636653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132636653
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
132636653
FA (Fanconi anemia) pathway
132636653
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GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Hanta_Gc_C
DUF538
Motif
Other DBs
NCBI-GeneID:
132636653
NCBI-ProteinID:
XP_060209594
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Position
4:complement(139579561..139588273)
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AA seq
634 aa
AA seq
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MSRRRLQIICSSDEEEEEEEELAIDNEENQNPNNNNIEMDILESSTTNFQSVTLNSPNQN
PTPNNAPNVHVADCGIGRVLEGLGLRLRKEWVESCVSGLEGMERGFLGLDDNAKAKLCFE
QFLYSDMNYCGAGMLPRDVHKLHLVDLKGPFVLQVDEIVNISCPVRDRYQKAAAGIKRCL
KLSMTDGIQRVFGMEYRPIKDLDVLAPSGLKVVICNVHVRRGLMMLVPEVIEVLGGMVEE
LEEARQRLVNEINKPPRGKRTRSGVVPPLATRATNAAWPREGVTAPEPADTSSRERSHFQ
VHEQGTSVVATSATEEINPVTPGLPSSTTITTPVYRRDAQSNFPTPAVSVPFNMNVTGPT
FSSVAATHAEDIHMDDMTTEGIDVSIRRERNDPVRLSSFTMEVEEHLSDVRSSPTTPASG
RSRESIPVSIGSVHNEDVEPDSLSTAAIDVDEIDFVDELDHPFILSGGKETPFTYLASLS
AKQAGMNGSASTVTGKIKCFLTGVKGFQYKQRSNYELRVFVDDGSLISEILIDHALVQKE
IGFSPAEVTTALDSSDKKRGSDMKETLKRFQKFLINFEGTMFVQLNGESPIPVATEMNQG
CPASDAWLLLKRLKPSTSPRQYHLHHPETINLCP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagacgcctccaaattatatgttcctctgatgaagaagaagaagaagaagaa
gaactcgccatcgacaacgaggaaaaccaaaacccaaacaataataatatcgaaatggac
attctagaatcttccactactaacttccaatcagtaaccctaaattccccaaaccaaaac
cctacacccaacaatgccccaaacgtccacgtggcagattgtggtattggtcgggtattg
gaagggttagggttgagattgaggaaagaatgggtagaatcatgtgttagtggacttgaa
ggaatggaaagagggtttttgggattggatgataatgcgaaggcgaagctctgtttcgag
cagtttttgtattcggatatgaattattgtggcgctggaatgcttccgagagatgtgcat
aagttgcatttggttgatcttaaaggtccctttgttcttcaggtagatgagattgtgaat
atcagttgtcctgttcgagataggtaccagaaagcagctgctggaataaagaggtgtctg
aaattgtccatgactgatggcattcagcgtgtgtttgggatggagtacagacctataaaa
gatcttgacgttctggctccttctggactgaaggttgttatctgtaatgttcacgttagg
cgcggacttatgatgttggtccctgaagtaatcgaagttctgggtgggatggtggaagag
ttagaagaagcaagacaacggctagttaatgaaataaataagccaccaagggggaaaaga
acaaggtctggagtggtccctcctttggcaactcgagctactaatgctgcatggccacgc
gaaggtgttactgctccagagcccgctgatacttcctcaagagaaaggtcacattttcag
gttcatgagcaaggaacgtctgttgttgctacttctgcaacagaagaaattaatcccgtt
acacctgggctaccatcttctacgacgatcaccactcctgtttatagaagagatgctcaa
tctaattttccaactccagctgtttctgtcccattcaatatgaatgttactgggcctacc
ttttcatctgttgcagctactcatgcggaggatatccacatggacgacatgaccaccgaa
ggcattgatgtttcaattagaagggaacgtaatgaccctgtccgtttgtcttctttcacc
atggaagtggaggaacatctttcagatgttagaagtagccctaccacacctgccagtggc
aggagcagagaaagcattcctgtctctatcggtagtgtccataatgaagatgtagagcct
gattcattgtctactgcagcaattgatgttgatgaaattgatttcgttgatgagttggac
catccatttatactttctggagggaaggaaacccctttcacttacttagctagtctgtcg
gctaagcaggctggtatgaatggcagtgcttccactgttacaggaaaaattaagtgcttt
cttactggtgtgaagggatttcagtataaacagaggagtaactacgagcttcgggttttt
gtggatgatggcagcctcatttctgagatccttatagatcatgctcttgtgcagaaagaa
atagggttttctcctgcagaggtaactacagctcttgattcttcagataaaaaacgaggc
agtgacatgaaggagacactgaaacgtttccagaaattcttgattaattttgagggaaca
atgtttgtacagttgaatggagaatccccaattccggttgctaccgaaatgaaccagggg
tgtcctgcctctgatgcatggttgcttctcaaaagactaaagccctctacttctccgcga
caatatcatcttcatcacccagagaccatcaatttatgcccttga
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