Lycium barbarum (goji berry): 132636688
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Entry
132636688 CDS
T09483
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132636688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132636688
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132636688
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
132636688
NCBI-ProteinID:
XP_060209660
LinkDB
All DBs
Position
4:140943259..140950553
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AA seq
466 aa
AA seq
DB search
MQVDLGKLFVGGISWDTNEERLKEYFSSYGEVVEAVIMKDRTTGRARGFGFVVFADPAAA
ERVVKEKHNIDGRMVEAKRAVPRDDQSTTSRSSNSIHGSPSPGPGPARTRKIFVGGLAST
VTEADFKSYFEQFGTITDAVVMYDHNTQRPRGFGFITYDSEDAVDRVLLKSFHELNDKMV
EVKRAVPKELSPGPSQSPLGRYNYGLNRMNNILDGYAQGYSSGTIGGYGVGMDGRFSQIA
GGRSVLSPFVSGYGVVPGLSPGYGGSANVNSSLSYGRGLNPYHSSNRLGGGIGFDVRNGG
DTSFLNSANRNLWSDGGLRHGTSSTSSNIGGGNFSNSGVWGSSISSQGIGGNVSNKSGNL
GYVNGDIVYGLAGGYGRNVTKSGTAMSSYAASRGGYDDGGALADFYGSGLGYDDHTWRSS
NPEQNSTGSLGYGLGNGPSDMSPQSSAGYVGSYGVGKRQPNRGIDG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttgatcttggtaagttatttgttggcgggatttcatgggacacaaatgaagaa
cgattaaaggagtattttagtagttatggggaggttgtagaagctgtaattatgaaggat
aggactactggccgtgctcgtggtttcggttttgtggtctttgctgatcctgctgctgct
gagagggtagttaaggagaaacacaacattgatggcaggatggtagaagcaaagagggca
gttccacgggatgaccagagcacgacaagtagaagcagtaatagtattcacggttctcct
agtcctggtccaggaccagcacgtacaagaaagatttttgttggaggtttagcatccact
gttaccgaggctgactttaagagttatttcgaacaattcggaacaatcacagatgcagta
gttatgtatgatcataacactcaaaggcctagaggatttggattcatcacttatgattca
gaggatgcagtggatagagtcttgctcaagagtttccatgagctgaatgataaaatggtt
gaggtcaagcgagctgtccccaaagagttatccccgggtcctagccaaagcccacttggt
cggtacaactatggattaaataggatgaataacatccttgatggctacgcacagggatac
tcttcaggtacaattggaggatatggagtcgggatggatggtagatttagccaaatcgct
gggggtagaagtgtcctttctccatttgtttctggttatggcgtggttccaggcctgagc
ccaggatatgggggaagtgcaaatgttaacagtagtttaagctatggacggggactaaat
ccatatcatagctcaaacaggcttggtggtggcattgggtttgatgtccgaaacggaggg
gacacatcattcttaaactccgcaaatcgcaatttatggagtgacggaggacttcgtcat
ggaacgagctccacaagctctaacattggaggaggaaactttagcaacagcggagtttgg
ggttcatcaatttcctctcaaggcattggaggaaatgtttctaacaaaagtggaaatctt
ggttatgtgaatggtgacattgtatacgggttggctggaggctatggaagaaatgtcaca
aaaagtgggaccgctatgtcatcatatgctgcatctaggggtggttatgatgatgggggt
gctttagctgatttctatggtagtggtttgggatatgatgatcacacttggcgttcttcg
aatcctgagcagaattcaactggttctcttggttatggactaggcaatggaccctctgac
atgtcacctcaaagttctgcaggttacgttggtagttatggagttggtaaaagacaacca
aacagaggaattgacggctag
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