Lycium barbarum (goji berry): 132636736
Help
Entry
132636736 CDS
T09483
Name
(RefSeq) LOW QUALITY PROTEIN: terpene synthase 17-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
132636736
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
132636736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
HTH_71
Motif
Other DBs
NCBI-GeneID:
132636736
NCBI-ProteinID:
XP_060209723
LinkDB
All DBs
Position
4:142289246..142299766
Genome browser
AA seq
553 aa
AA seq
DB search
MELCTQNTAADEVITRRSGKHHPTVWGDHFLVYANLPGANKGEEKQHEDLKQEVRKMLEM
APSKSLQNLDLINTIQCLGVAYQFEREIDESLSYMYTRYEEWIGEVDGSDLHAIALCFRL
LRQQGYYASCDAFRKFTDDQGNFNKELVKDVHGMLSLYEAAQFRVHGEEILDEALNFTIT
QLKVILPKLSNSLAQQVSNALKFPIKDGMVRVETRKYVSFYQENESHNEVLLNFAKLDFN
ILQRLHKKELCDITRWWKELEMVKGLPYARDKLVELYFWSLGVYFEPQYGVARKILTEVL
CFISILDDTYDIYGTLDELTLLTEAIERWNVDASEQLPPYLKIIYRGLLDVYNEVEKELA
QENKSFLVDYSITEMKKVLRSYFQEAQWYHGKKVPTIEHYVKNGIPSSGYQLLATTCWLG
MGEVATKDAFDWIATEPPILVASCIIARLLNDLLSHEHEQERGDVASAIECYMNEYGVTX
EAHIEIRKIIENHWKDLNQEYLNLTTVIPRILLMTIINQTRAVEFIYKDEDAYTFSKNNL
KDVISMVLIDPII
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtgcacacaaaatactgcggctgatgaggttattacacgtcgttcaggcaag
catcatcctactgtttggggagaccattttcttgtgtatgctaatcttccgggagccaat
aagggggaagagaagcagcatgaagacctaaaacaagaagtgagaaagatgctagagatg
gctccttcaaaatctttgcaaaatcttgatctgatcaacacaatccaatgtcttggcgta
gcttatcagtttgaacgtgagattgatgaatcattgagttacatgtacacccgttatgaa
gaatggattggtgaagttgatggaagtgacctacatgctattgctctatgctttcgatta
ctcaggcaacaaggttattatgcctcatgtgatgcttttaggaagttcactgacgaccaa
ggaaacttcaacaaagaattggttaaagacgtgcatggaatgttgagcttatatgaggca
gcacaattcagggtacacggcgaagaaattctggatgaagcactgaatttcaccatcact
cagttaaaagtaattttgcctaaattgagcaactcccttgcacaacaagtcagtaacgca
ctgaagtttccaattaaagatggtatggtgagggtagaaacaaggaaatacgtatcattt
taccaagaaaatgaatcacacaatgaagtgttactaaactttgccaaactggactttaac
atcttgcaaaggttgcataaaaaggagctatgtgatatcacaaggtggtggaaagaactt
gaaatggtgaagggattaccttatgcaagagacaaattggttgagttatacttctggagt
ttaggtgtctactttgaacctcagtacggagttgcgaggaaaatattaacagaagtttta
tgcttcatttctattttggatgacacatatgatatctatggaacactggatgaacttact
ctcctcacagaggcaattgaaaggtggaatgttgatgcttcagaacagttaccaccatat
ctgaagattatttaccgtggtcttctagatgtttacaatgaagttgagaaagagttggca
caagaaaacaagtcatttctagtcgactattccataactgagatgaaaaaggtgttgagg
tcttacttccaagaggcacaatggtatcacgggaagaaagtgccaacaatagagcattat
gtgaagaacggaattccatcaagcggttaccaattgcttgcaactacttgttggttaggc
atgggagaggtagcaacaaaggatgcatttgattggatagcaactgaacctccgatactt
gttgcttcctgtatcattgcaagattactcaatgatcttttgtcacatgagcatgaacag
gaaagaggagatgtagcttctgctattgaatgttatatgaatgaatatggtgtcacanaa
gaagcacacatagagataaggaaaataatagagaatcattggaaggatttgaatcaagaa
tacctcaacctcacaaccgttataccaagaatcttgctcatgactataatcaatcagaca
agagcggtggagttcatatataaagatgaagatgcttatactttttccaaaaataacttg
aaagacgtcatctctatggtgctaattgatcctattatatag
DBGET
integrated database retrieval system
