Lycium barbarum (goji berry): 132636840
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Entry
132636840 CDS
T09483
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132636840
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132636840
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132636840
03029 Mitochondrial biogenesis [BR:
lbb03029
]
132636840
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
132636840
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class I (G)
132636840
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132636840
Prokaryotic type
Other AARSs
132636840
Mitochondrial biogenesis [BR:
lbb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
132636840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
132636840
NCBI-ProteinID:
XP_060209864
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Position
4:145466036..145477754
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AA seq
650 aa
AA seq
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MSSFALSLKIPPLLSLSQPPSTKQFINPNFSHFFLNTCILRATTRRFFGAVEVSSRTIST
METDKEIIGSQKQQLAKLFEESLRAAFPDVSDVQPLIAICNDAKHGDYQCNNAMSLWNKL
KGKGTQLKGPQPVGKAIIENLPASEMIEKCSIAGPGFVNIVLARQWIAKSLQKMLIDGIE
TWAPKLPVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRNHVGDWGT
QFGMLIEFLFDQLPNWEADSTPAIGDLEGFYKASKQRFDSDAEFKERAQKAVVSLQGGEE
KYQKAWAQICEISRKEFQKVYERLGVHLEEKGESFYNPYIPKALELLNEKGLIEESEGAR
VIFIEGKKIPLIVVKRDGGFNYASTDLTALWYRLNEEKADWMVYVTDVGQREHFEMFFSA
AKRAGWLPSNDKDYPKASHVGFGLVLGEDGKRFRTRSTEVVKLVDLLDEAKSRCKSALEE
RGKGKEWTAEELERTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLSDKGNTAVYLLYAHA
RICSIIRKSGRDIEELKKSGAIDLAHPDERMLGLHLLQFAEIVEEACTNLLPNLVCEYLY
NISEDFTGFYTNCQVVGSAEETSRLLLCEATAVVMRKCFHLLGITPVYKI
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctttgctttgtctctcaaaattccaccattactttcactttctcagcctcct
tctactaagcaatttataaaccccaatttctcacattttttcctcaatacctgtattctc
agagcaacaactaggaggttttttggtgcggtagaagtatcttcaaggacaatatcaacc
atggaaactgataaagaaattattgggagtcaaaagcagcaattagcaaagctatttgag
gaatcgcttagagcagcattccctgatgtttcagatgtgcagcctttgattgctatttgc
aatgatgcaaaacatggtgactatcaatgcaataatgcaatgagcttgtggaataaactt
aaaggcaaaggtacacaattgaagggtcctcaacctgttggaaaggcaattatagagaat
cttcctgcatcagaaatgatagagaagtgctctatagcaggacccggttttgttaatatt
gtattagcaaggcaatggatagcaaagagtcttcaaaagatgctaatagatggcatagag
acatgggcaccaaagcttcctgttaaaagggccgtcgttgacttttcgtcacccaatata
gcaaaagagatgcatgtgggtcatttaagatctactataattggagacactctggcccgt
atgctggagttttccaatgttgaagttcttcggagaaaccatgtgggtgactggggcaca
cagttcggaatgttaattgagttcctttttgatcaacttcctaattgggaagctgatagt
accccagctattggagatttggagggattctataaggcttcaaaacaaagatttgacagt
gatgctgaattcaaggaaagggcgcaaaaggcggtcgttagtcttcagggcggtgaggag
aagtatcagaaggcatgggcacaaatatgtgagatcagccgaaaagaatttcagaaggtt
tatgagagacttggggttcacttagaggaaaagggtgaaagcttttacaatccgtatatt
cccaaggctttagagctgcttaatgagaagggattaattgaagaaagtgaaggtgctcgt
gtcatctttattgaagggaagaaaatacctcttattgttgtgaagagggatggtggtttc
aactatgcttcaactgatcttaccgctctatggtatcgactgaatgaagaaaaagcagac
tggatggtatatgtgactgacgttggacagcgagagcactttgagatgttcttttctgct
gcaaaacgtgcgggctggcttccttcaaatgacaaagattaccccaaagccagtcatgta
ggatttggtctagttttaggagaagatgggaaacggttccgtactcgaagtactgaggtg
gttaagcttgttgatttgcttgatgaggccaagagccggtgtaaatcagcacttgaagag
agaggtaagggtaaagaatggacggccgaggaactagagcgaactgctgaggctgtagga
tatggtgctgttaaatatgctgacctgaagaacaacaggttgaccaactatacctttaac
tttgatcagatgcttagtgacaagggaaataccgctgtttatttgctgtacgcgcatgct
cgcatttgttcaatcatcaggaagtctggcagagatatagaggagttaaaaaagagcggg
gcaatagatttggctcatccagatgaacgtatgctaggtctccatttgctccagtttgct
gaaattgttgaagaagcttgtaccaatcttttgccaaacttggtgtgtgaatatctttac
aatatatctgaagacttcactggattctataccaactgtcaggtcgttggctcggccgag
gaaacaagcagactcttgctgtgtgaggcaacagcagttgtcatgaggaagtgtttccat
ctattgggcatcactcctgtttacaaaatttaa
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