Lycium barbarum (goji berry): 132637663
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Entry
132637663 CDS
T09483
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Module
lbb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132637663
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
132637663
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
132637663
NCBI-ProteinID:
XP_060210706
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Position
4:complement(109539400..109542784)
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AA seq
346 aa
AA seq
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MGSIVLPGGKLFLLSPILFQGPCNSPIVKLQVSGNITAHTNSTKWVGCENNSWLYFSSVS
GLIISGTGHINGQGASWWNIANPLHKVVKGTCDRPTAIRFNFCNDLQLNGVNLVDSPRNH
ISITFSKRVTISHITISAPEDSPNTDGIDISTSHQVHILDSTIQTGDDCIAINLGCSNIN
ITGISCGPGHGISVGSLGVNGTFATVENINVAHCTLQGTQNGVRIKTWQGGMGFARFINF
ENINLTDVRNPIIIDQFYCNGAHDCGIKPNAVQVSHVTYMDVFGTTPSKIAINLNCSDNS
TACTNLLFHQINITSALPQKQTLAACHNAHGQVGNSSLPPITCLKP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcattgtcctaccaggtggaaagttattcttattgagccctatattatttcaa
ggcccttgcaactctcccattgttaaactgcaggtttcagggaatataacggcacacaca
aattcaaccaaatgggtagggtgtgaaaataatagttggctttatttcagtagcgtatct
ggtctcatcatcagcggcactggacacattaatggccaaggtgcttcctggtggaacatc
gcaaatcctcttcataaggttgtcaaggggacttgcgacaggccaacggcgatacgcttt
aatttttgtaatgatcttcaattgaatggagtgaacctggttgatagtccaagaaatcat
attagcatcacatttagcaaaagggtaactatctcccatatcactataagtgcacctgaa
gatagtcccaacactgatggtattgacatctctacttctcatcaagttcacattttggat
tccaccattcaaacaggtgatgattgtattgcgatcaatttgggatgttctaatatcaat
attactggtatttcatgtggaccaggacatggtataagtgtaggaagcctaggagttaat
gggacttttgctactgtggagaatatcaatgtagcacattgcaccctccaaggaacccaa
aatggtgtaagaatcaaaacatggcagggtggtatggggtttgctagatttataaatttt
gaaaatatcaatctcacagacgttagaaatcccatcattatagaccaattctattgcaac
ggcgctcatgattgtggaattaagccaaatgcagtccaagtgagtcatgtgacatacatg
gatgtttttgggacaacaccaagcaagatagcaataaatctaaattgcagcgacaacagc
acagcttgcaccaacttattgtttcatcaaattaacataacctcagctttgcctcaaaaa
caaactcttgcagcttgtcataatgctcatggacaagttggcaattcaagtttaccccca
ataacatgcttgaaaccataa
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