KEGG   Lycium barbarum (goji berry): 132637922
Entry
132637922         CDS       T09483                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb04142  Lysosome
lbb04144  Endocytosis
lbb05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    132637922
   04142 Lysosome
    132637922
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    132637922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lbb04131]
    132637922
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lbb04147]
    132637922
Membrane trafficking [BR:lbb04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    132637922
Exosome [BR:lbb04147]
 Exosomal proteins
  Proteins found in most exosomes
   132637922
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B IcmW Totivirus_coat
Other DBs
NCBI-GeneID: 132637922
NCBI-ProteinID: XP_060210921
LinkDB
Position
1:132234619..132249806
AA seq 1705 aa
MAVAANAPITMKETLTLSSIGVNPQFITFTNVTMESDKYICVRETAPQNSVVIIDMSMPN
QPLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKQKMKSHQMPEQVVFWKW
ITPKLLGIVTQTSVYHWSIEGDTEPIKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPG
SPERPQLVKGNMQLYSVDQQRSQSLEAHAASFASFRVPGSDRDSILISFATKSLNAGQVV
SKLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVSMQISHKYSLIYVITKLGLLFVYD
LETATAVYRNRISPDPIFLTAEASSIGGFYAINRRGQVLLATVNETTIIPFVSGQLNNLE
LAVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTSDTVAKFQSVPV
QPGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLADDKLECSEELGDL
VKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDP
QGAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHGFLQTKVL
EINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLFVRALQHYTELPDIKRVIVNTHA
IEPQALVEFFGTLSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGVDACIKIFEQF
KSYDGLYFFLGSYLSSSEDPDIHFKYVEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMD
AKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECP
EDFIKGLILSVRSLLPVEPLVDECEKRNRLPLLTQFLEHLVSEGSQDVHVHNALGKIIID
SNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQAR
YVVVRMDADLWEKVLNPENEFRRQLIDQVVSTALSESKSPEQVSAAVKAFMTADLPHELI
ELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLH
EEAFAIFKKFNLNVQAVNVLLDNIRDINRSVEFAFRVEEDAVWSQVAKAQLREGLISDAI
ESFIRADDTTQFLDVIRAAEDADVYNDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLSD
IEEFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLAITLVKLNQFQGAVDAAR
KANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMES
GLGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLY
IQYDEFDNAATTVMNHSPDAWDHMQFKDIIVKVANVELYYKAVHFYLQEHPDLINDMLNV
LALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESVD
LHDNFDQIGLAQKIEKHELLEMRRVAAYIYKRAGRWKQSIALSKKDNLYKDAMETASQSG
DRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNKMIDFAFPYLLQFIRE
YTGKVDELIKDKIEAQSEAKAKENEEKNVMKQQNMYAQLLPLALPAPPMPGMGSAGMGGG
FAPPPPPPMGGMGMPPFGMPPMGPY
NT seq 5118 nt   +upstreamnt  +downstreamnt
atggctgttgctgctaatgctccgatcactatgaaagagacccttactttgtcaagtata
ggggtcaatccgcagttcatcacgttcacgaatgtaacgatggaatcagacaagtatata
tgtgttcgggagacggcaccacaaaatagtgtggtgattattgatatgagtatgccaaac
cagcctttgcgacgccctattactgcagactctgctcttatgaatcccaattccagaatt
ttggctctaaaagctcaagtacccggaactactcaagatcacttacaaattttcaatatt
gaggcaaagcagaaaatgaagtcacatcagatgcctgagcaggttgttttctggaagtgg
attaccccgaagcttttaggtatcgtcacacagacctcagtctatcattggtcaattgaa
ggtgatactgagcctataaagatgtttgatagaacagccaatctagccaataaccaaata
atcaattatcgttgcgatccttcagagaaatggttggttttgatcggtattgctccaggt
tcaccggagaggccccaactggtcaaaggaaatatgcaattatattcagtggatcagcag
cgaagtcaatctctagaggcacacgctgcatcatttgcatcattcagagtacctggaagt
gatagggattccatactcatttcttttgccacgaaatccttgaatgctgggcaggttgta
tcaaaattgcacgtcattgagctgggagcgcagccagggaaaccttcgttttcaaaaaaa
caggcagatcttttcttccctccagattttgctgatgatttcccagtttccatgcagata
tctcataagtatagtttaatttatgtcatcacaaagcttgggcttcttttcgtctatgac
ctggaaacagctactgcggtatacagaaataggattagcccggaccctattttcctgaca
gctgaagcttcgtcaattggtggtttctatgccatcaacaggcgaggccaagtgttgcta
gccacagtaaatgaaacaacaattataccttttgtcagtggacaattgaacaatctggag
cttgctgtcaatcttgccaaaagaggaaaccttcccggtgctgagaatttggttgtccag
cgcttccaagaattgtttgctcaaaccaagtacaaagaggctgctgagcttgctgcggaa
tcacctcagggcatactccgtacatctgatactgtggctaagtttcagagcgttcctgtt
caaccagggcaaacacctcctcttttgcagtactttgggacacttttgacaaaagggaag
ctcaatgcttttgagtcattggaactgtcacgccttgttgtcaaccaaaataagaagaac
cttttggagaactggttagctgacgataagctggagtgcagtgaggaacttggcgacctt
gtgaagactgttgataatgacctcgccttgaagatatacatcaaagcaagagcaactcca
aaagttgttgctgctttcgctgagcgcagggagtttgacaagattttgatttattccaag
caggttggctatacacctgactatctgttccttctgcaaacaattcttcgatctgatcct
cagggagctgttaacttcgcactcatgatgtcccaaatggagggcggttgtccagttgat
tataatacaatcactgacctttttctacagaggaacatgatccgcgaggcaacagcattt
ttgttggatgttctgaaacctaaccttccagaacatggttttttgcagactaaggtattg
gaaatcaatctcgtgactttccccaatgtagcagatgctatattagcaaatggaatgttc
agtcactatgatagacctcgaattgctcaactttgtgaaaaagctggtctattcgtgcgg
gctctgcagcattatactgaacttcctgatatcaagcgtgtcattgtgaacacgcatgcg
attgagcctcaggctctggttgagttctttgggactctttcacgtgaatgggctcttgag
tgcatgaaggacttgctagtgatcaatatcaaaggcaaccttcaaataattgttcaggta
gcgaaagagtattgtgagcagttgggtgttgatgcctgcataaagatttttgagcaattc
aagtcttatgatggattgtacttcttcttgggatcatatttgagttccagtgaggatccc
gatattcacttcaagtatgttgaggctgctgccaagactggacaaatcaaggaagttgag
cgtgtgacaagagaatcaaacttttatgaccctgaaaagacgaagaacttcttgatggac
gccaaacttcctgatgctcggcctctaattaatgtttgtgaccgttttggttttgttcct
gatctcacacactacctctataccaacaatatgctacggtatattgaaggttatgtccaa
aaggtcaacccaggaaatgctcctttagttgttggacagctattggatgatgagtgtcct
gaggattttatcaaaggcttgatcctttctgttcgttctctgctacctgttgagcccctt
gtggatgaatgtgaaaagaggaaccgcctcccactgcttactcagttcttggagcatctt
gtgagtgaaggaagccaagatgtgcatgtacacaatgctctgggtaagatcatcatagat
agcaacaataacccagagcacttcctgacaaccaacccatattatgattcacgtgttgtg
ggtaaatattgtgagaagcgcgatcctacccttgctgttgttgcatataggagagggcaa
tgtgatgacgaacttattaatgtaacaaacaagaactctttgttcaaattgcaagccagg
tatgtcgttgtgaggatggatgctgacctttgggagaaagttcttaaccctgaaaatgag
ttcagaaggcagcttatcgatcaagttgtctccactgctctgtctgagagcaaaagccca
gaacaagtttctgctgctgttaaagctttcatgactgctgatcttccgcatgaactgatt
gagcttcttgaaaagattgtgctccagaactctgctttcagtgggaactttaatctgcaa
aacttgcttatcttgacagccattaaagctgatccatctagagttatggattatatcaac
aggcttgataattttgatggacctgcagtaggggaggtagctgtagaagcccaacttcat
gaagaagcttttgcaatcttcaagaagttcaatttaaatgtccaggctgtcaatgttctg
ctagataatattcgtgatataaaccggtctgtcgagtttgccttccgagttgaagaagat
gctgtttggagccaagtggctaaggctcaactgagagaaggattaatcagtgatgctatt
gagtcgtttattcgtgcagatgataccacccaatttttggatgtcattcgtgctgcagag
gatgcagatgtttacaatgacttggtgaaatatctgctgatggtaaggcagaagacaaag
gagcccaaggttgacagtgaactaatctatgcatatgctaaaatagatcgattgagtgac
attgaagagtttattctcatgccaaatgttgctaatctaccgaatgttggtgaccggttg
tatgatgaagccttgtatgaagctgcaaagatcatatttgcctttatttcaaactgggcc
aaattggctatcacacttgtgaagctaaatcaatttcaaggtgctgttgatgcagcacgc
aaagcaaatagttcaaaaacgtggaaagaagtgtgctttgcttgtgttgacgccgaagaa
ttccggttagctcagatttgtgggcttaacattataatacaggtggatgatctggaggaa
gtgagtgaatattaccaaaacagaggatgtttcaatgaattgatctcccttatggagagt
gggctgggtttggagcgtgcccatatgggtatcttcacagaacttggtgtcctttatgcc
agataccgttacgagaagctcatggaacacattaaattattttccacccgtctcaacatt
cccaagcttattcgtgcctgtgatgagcagcaacactggaaagaactcacatatttgtat
atccaatatgatgaatttgacaatgctgccactaccgtcatgaatcattctccagatgct
tgggatcatatgcagttcaaagacattattgtcaaagttgctaatgtggagctttattac
aaggccgtccacttctatttgcaagagcatcctgatctcatcaatgatatgctaaatgtt
cttgcgcttagggtagaccacacccgtgtagttgacataatgagaaaggctggtcatctt
cgcctagtgaagccttacatgattgctgttcaaagtaacaatgtttctgctgtaaacgag
gcccttaatgagatatatgttgaagaagaagactatgatagattacgtgaatcagtagat
ttgcatgataattttgaccagattggtcttgcgcagaagatagagaaacatgagcttctt
gagatgaggcgtgttgctgcttatatctataaaagggctggtcgctggaagcaatccatt
gctctgtcgaagaaagataatctttacaaagatgcaatggagactgcctcacaatctggg
gatcgtgaacttgctgaagagttgcttgtttacttcattgaacagggaaagaaagaatgc
tttgcgtcatgcttgtttgtttgttatgatttgattcgcccagatgttgctcttgaacta
gcgtggatgaataagatgatcgactttgcattcccttacctgttacagtttattcgtgaa
tatactggcaaggttgatgagctgataaaagataaaatagaggctcaaagtgaagcaaaa
gccaaagagaatgaagagaagaacgttatgaagcagcagaatatgtatgcacagttgctg
cctctggctttgcctgctccaccaatgccgggcatgggaagtgcaggcatgggaggagga
tttgctccacccccgccacctccaatgggtggaatgggaatgcctccatttggtatgcca
cccatgggtccctactaa

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