Lycium barbarum (goji berry): 132637922
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Entry
132637922 CDS
T09483
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04142
Lysosome
lbb04144
Endocytosis
lbb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132637922
04142 Lysosome
132637922
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132637922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132637922
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132637922
Membrane trafficking [BR:
lbb04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
132637922
Exosome [BR:
lbb04147
]
Exosomal proteins
Proteins found in most exosomes
132637922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
IcmW
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
132637922
NCBI-ProteinID:
XP_060210921
LinkDB
All DBs
Position
1:132234619..132249806
Genome browser
AA seq
1705 aa
AA seq
DB search
MAVAANAPITMKETLTLSSIGVNPQFITFTNVTMESDKYICVRETAPQNSVVIIDMSMPN
QPLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKQKMKSHQMPEQVVFWKW
ITPKLLGIVTQTSVYHWSIEGDTEPIKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPG
SPERPQLVKGNMQLYSVDQQRSQSLEAHAASFASFRVPGSDRDSILISFATKSLNAGQVV
SKLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVSMQISHKYSLIYVITKLGLLFVYD
LETATAVYRNRISPDPIFLTAEASSIGGFYAINRRGQVLLATVNETTIIPFVSGQLNNLE
LAVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTSDTVAKFQSVPV
QPGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLADDKLECSEELGDL
VKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDP
QGAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHGFLQTKVL
EINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLFVRALQHYTELPDIKRVIVNTHA
IEPQALVEFFGTLSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGVDACIKIFEQF
KSYDGLYFFLGSYLSSSEDPDIHFKYVEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMD
AKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECP
EDFIKGLILSVRSLLPVEPLVDECEKRNRLPLLTQFLEHLVSEGSQDVHVHNALGKIIID
SNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQAR
YVVVRMDADLWEKVLNPENEFRRQLIDQVVSTALSESKSPEQVSAAVKAFMTADLPHELI
ELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLH
EEAFAIFKKFNLNVQAVNVLLDNIRDINRSVEFAFRVEEDAVWSQVAKAQLREGLISDAI
ESFIRADDTTQFLDVIRAAEDADVYNDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLSD
IEEFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLAITLVKLNQFQGAVDAAR
KANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMES
GLGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLY
IQYDEFDNAATTVMNHSPDAWDHMQFKDIIVKVANVELYYKAVHFYLQEHPDLINDMLNV
LALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESVD
LHDNFDQIGLAQKIEKHELLEMRRVAAYIYKRAGRWKQSIALSKKDNLYKDAMETASQSG
DRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNKMIDFAFPYLLQFIRE
YTGKVDELIKDKIEAQSEAKAKENEEKNVMKQQNMYAQLLPLALPAPPMPGMGSAGMGGG
FAPPPPPPMGGMGMPPFGMPPMGPY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgctgctaatgctccgatcactatgaaagagacccttactttgtcaagtata
ggggtcaatccgcagttcatcacgttcacgaatgtaacgatggaatcagacaagtatata
tgtgttcgggagacggcaccacaaaatagtgtggtgattattgatatgagtatgccaaac
cagcctttgcgacgccctattactgcagactctgctcttatgaatcccaattccagaatt
ttggctctaaaagctcaagtacccggaactactcaagatcacttacaaattttcaatatt
gaggcaaagcagaaaatgaagtcacatcagatgcctgagcaggttgttttctggaagtgg
attaccccgaagcttttaggtatcgtcacacagacctcagtctatcattggtcaattgaa
ggtgatactgagcctataaagatgtttgatagaacagccaatctagccaataaccaaata
atcaattatcgttgcgatccttcagagaaatggttggttttgatcggtattgctccaggt
tcaccggagaggccccaactggtcaaaggaaatatgcaattatattcagtggatcagcag
cgaagtcaatctctagaggcacacgctgcatcatttgcatcattcagagtacctggaagt
gatagggattccatactcatttcttttgccacgaaatccttgaatgctgggcaggttgta
tcaaaattgcacgtcattgagctgggagcgcagccagggaaaccttcgttttcaaaaaaa
caggcagatcttttcttccctccagattttgctgatgatttcccagtttccatgcagata
tctcataagtatagtttaatttatgtcatcacaaagcttgggcttcttttcgtctatgac
ctggaaacagctactgcggtatacagaaataggattagcccggaccctattttcctgaca
gctgaagcttcgtcaattggtggtttctatgccatcaacaggcgaggccaagtgttgcta
gccacagtaaatgaaacaacaattataccttttgtcagtggacaattgaacaatctggag
cttgctgtcaatcttgccaaaagaggaaaccttcccggtgctgagaatttggttgtccag
cgcttccaagaattgtttgctcaaaccaagtacaaagaggctgctgagcttgctgcggaa
tcacctcagggcatactccgtacatctgatactgtggctaagtttcagagcgttcctgtt
caaccagggcaaacacctcctcttttgcagtactttgggacacttttgacaaaagggaag
ctcaatgcttttgagtcattggaactgtcacgccttgttgtcaaccaaaataagaagaac
cttttggagaactggttagctgacgataagctggagtgcagtgaggaacttggcgacctt
gtgaagactgttgataatgacctcgccttgaagatatacatcaaagcaagagcaactcca
aaagttgttgctgctttcgctgagcgcagggagtttgacaagattttgatttattccaag
caggttggctatacacctgactatctgttccttctgcaaacaattcttcgatctgatcct
cagggagctgttaacttcgcactcatgatgtcccaaatggagggcggttgtccagttgat
tataatacaatcactgacctttttctacagaggaacatgatccgcgaggcaacagcattt
ttgttggatgttctgaaacctaaccttccagaacatggttttttgcagactaaggtattg
gaaatcaatctcgtgactttccccaatgtagcagatgctatattagcaaatggaatgttc
agtcactatgatagacctcgaattgctcaactttgtgaaaaagctggtctattcgtgcgg
gctctgcagcattatactgaacttcctgatatcaagcgtgtcattgtgaacacgcatgcg
attgagcctcaggctctggttgagttctttgggactctttcacgtgaatgggctcttgag
tgcatgaaggacttgctagtgatcaatatcaaaggcaaccttcaaataattgttcaggta
gcgaaagagtattgtgagcagttgggtgttgatgcctgcataaagatttttgagcaattc
aagtcttatgatggattgtacttcttcttgggatcatatttgagttccagtgaggatccc
gatattcacttcaagtatgttgaggctgctgccaagactggacaaatcaaggaagttgag
cgtgtgacaagagaatcaaacttttatgaccctgaaaagacgaagaacttcttgatggac
gccaaacttcctgatgctcggcctctaattaatgtttgtgaccgttttggttttgttcct
gatctcacacactacctctataccaacaatatgctacggtatattgaaggttatgtccaa
aaggtcaacccaggaaatgctcctttagttgttggacagctattggatgatgagtgtcct
gaggattttatcaaaggcttgatcctttctgttcgttctctgctacctgttgagcccctt
gtggatgaatgtgaaaagaggaaccgcctcccactgcttactcagttcttggagcatctt
gtgagtgaaggaagccaagatgtgcatgtacacaatgctctgggtaagatcatcatagat
agcaacaataacccagagcacttcctgacaaccaacccatattatgattcacgtgttgtg
ggtaaatattgtgagaagcgcgatcctacccttgctgttgttgcatataggagagggcaa
tgtgatgacgaacttattaatgtaacaaacaagaactctttgttcaaattgcaagccagg
tatgtcgttgtgaggatggatgctgacctttgggagaaagttcttaaccctgaaaatgag
ttcagaaggcagcttatcgatcaagttgtctccactgctctgtctgagagcaaaagccca
gaacaagtttctgctgctgttaaagctttcatgactgctgatcttccgcatgaactgatt
gagcttcttgaaaagattgtgctccagaactctgctttcagtgggaactttaatctgcaa
aacttgcttatcttgacagccattaaagctgatccatctagagttatggattatatcaac
aggcttgataattttgatggacctgcagtaggggaggtagctgtagaagcccaacttcat
gaagaagcttttgcaatcttcaagaagttcaatttaaatgtccaggctgtcaatgttctg
ctagataatattcgtgatataaaccggtctgtcgagtttgccttccgagttgaagaagat
gctgtttggagccaagtggctaaggctcaactgagagaaggattaatcagtgatgctatt
gagtcgtttattcgtgcagatgataccacccaatttttggatgtcattcgtgctgcagag
gatgcagatgtttacaatgacttggtgaaatatctgctgatggtaaggcagaagacaaag
gagcccaaggttgacagtgaactaatctatgcatatgctaaaatagatcgattgagtgac
attgaagagtttattctcatgccaaatgttgctaatctaccgaatgttggtgaccggttg
tatgatgaagccttgtatgaagctgcaaagatcatatttgcctttatttcaaactgggcc
aaattggctatcacacttgtgaagctaaatcaatttcaaggtgctgttgatgcagcacgc
aaagcaaatagttcaaaaacgtggaaagaagtgtgctttgcttgtgttgacgccgaagaa
ttccggttagctcagatttgtgggcttaacattataatacaggtggatgatctggaggaa
gtgagtgaatattaccaaaacagaggatgtttcaatgaattgatctcccttatggagagt
gggctgggtttggagcgtgcccatatgggtatcttcacagaacttggtgtcctttatgcc
agataccgttacgagaagctcatggaacacattaaattattttccacccgtctcaacatt
cccaagcttattcgtgcctgtgatgagcagcaacactggaaagaactcacatatttgtat
atccaatatgatgaatttgacaatgctgccactaccgtcatgaatcattctccagatgct
tgggatcatatgcagttcaaagacattattgtcaaagttgctaatgtggagctttattac
aaggccgtccacttctatttgcaagagcatcctgatctcatcaatgatatgctaaatgtt
cttgcgcttagggtagaccacacccgtgtagttgacataatgagaaaggctggtcatctt
cgcctagtgaagccttacatgattgctgttcaaagtaacaatgtttctgctgtaaacgag
gcccttaatgagatatatgttgaagaagaagactatgatagattacgtgaatcagtagat
ttgcatgataattttgaccagattggtcttgcgcagaagatagagaaacatgagcttctt
gagatgaggcgtgttgctgcttatatctataaaagggctggtcgctggaagcaatccatt
gctctgtcgaagaaagataatctttacaaagatgcaatggagactgcctcacaatctggg
gatcgtgaacttgctgaagagttgcttgtttacttcattgaacagggaaagaaagaatgc
tttgcgtcatgcttgtttgtttgttatgatttgattcgcccagatgttgctcttgaacta
gcgtggatgaataagatgatcgactttgcattcccttacctgttacagtttattcgtgaa
tatactggcaaggttgatgagctgataaaagataaaatagaggctcaaagtgaagcaaaa
gccaaagagaatgaagagaagaacgttatgaagcagcagaatatgtatgcacagttgctg
cctctggctttgcctgctccaccaatgccgggcatgggaagtgcaggcatgggaggagga
tttgctccacccccgccacctccaatgggtggaatgggaatgcctccatttggtatgcca
cccatgggtccctactaa
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integrated database retrieval system