Lycium barbarum (goji berry): 132638291
Help
Entry
132638291 CDS
T09483
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00541
Biosynthesis of various nucleotide sugars
lbb01100
Metabolic pathways
lbb01250
Biosynthesis of nucleotide sugars
Module
lbb_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
132638291
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
132638291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-GeneID:
132638291
NCBI-ProteinID:
XP_060211216
LinkDB
All DBs
Position
4:complement(23992575..23996122)
Genome browser
AA seq
654 aa
AA seq
DB search
MSPQPAPYVPKNVLITGAAGFIPSHVTNRLTKLYPDYRIVALDKLDYCSSLKNLEPSYSS
PNFKFVKADITSADLINHLLVEEKIDTIMHFAAQTHVDNSFGNSFEFTINNIYGTHVLLE
ACKLTKSIKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS
YGLPTITTRGNNVYGPNQFPEKLIPKFIILAMKGERLPIHGDGSNVRSYLYSDDVAEAFD
VILHKGVIGHVYNIGTKKERRVLDVAEDICKLFGLNTQEVIELVQDRPFNDQRYFLDDQK
LKKLGWQERTPWEEGLKKTLDWYTKNPDWWGDITGALHPHPRISNIMPSHDEGCLLQLIK
GSKKGSGSDLKFLIYGRTGWIGGLLGKMCEERGIAYEYGLGRLQDRNSLMHDMVRVKPTH
VFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICKEADILVMNFATGCIFEYDEGH
PLGSGIGFKEEEKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLSNPRNFITK
ITRYDKVVNIPNSMTVLDELLPISIEMAKRNCRGIWNFTNPGVVSHNEILEMYRDYIDPK
FKWQNFDLQEQAKVIIAPRSNNELDTTKLKKEFPELLSIKESIIKYVFGPNKKT
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccccaaccagctccttatgtacccaaaaatgtcctcataacgggtgcagcaggc
ttcattccctcgcatgtaaccaacaggttgaccaagctttatcctgactacaggattgtt
gctcttgacaagctcgattattgctcgagtctgaaaaatttggagcctagttactcatct
ccaaattttaaatttgtcaaggctgatattacaagtgctgatcttatcaatcatcttttg
gttgaagagaagattgacacaattatgcattttgcagcacagactcatgtggataattca
tttggaaattcattcgagttcacaatcaataatatttatggtacccatgtgcttcttgaa
gcttgtaagttgactaaatccatcaagagattcattcatgttagtacagatgaagtttat
ggtgagaccgatttggagaccgacattggcaatcctgaagcttctcaactccttcctact
aatccatattctgcaactaaagctggagcggaaatgcttgtcatggcttaccataggtct
tatggcctaccgacaatcacaacccgagggaataacgtttatggcccgaaccagttccct
gagaagttgattccaaagttcataattcttgccatgaagggcgagcgtttgccaattcat
ggggatggatcgaacgttaggagttatttgtactctgatgatgttgctgaggcatttgat
gtgatacttcacaaaggggtgattggccatgtgtataacattggcactaaaaaggagaga
agagttttggatgtggccgaggacatatgcaaattattcggcttgaacactcaagaagtt
atcgagcttgtgcaggacagaccctttaatgaccaaaggtatttcttggatgatcaaaag
cttaagaagttagggtggcaagaaaggaccccttgggaggaaggactaaaaaagaccctc
gattggtacaccaaaaatcctgattggtggggcgatataaccggagcccttcacccacat
ccgagaatttcaaatattatgccttcacatgatgaagggtgtttgttgcagcttataaaa
ggaagcaagaaaggcagtggctcggacttgaaattcttgatttatggaagaactggttgg
atcggagggttgttaggaaagatgtgtgaagagcgtggaatagcatacgagtatgggtta
gggcgattgcaggataggaattcgctaatgcatgacatggtaagggtaaaaccgacccat
gttttcaatgcagctggtgttactgggaggcctaatgtggattggtgtgaatcacataaa
gtagagacgattagaactaatgttgcaggtacactaactttggctgatatctgtaaagaa
gcggatatcttggtgatgaatttcgcgaccggttgcatatttgagtatgatgaggggcac
ccactaggctcgggcatcggattcaaggaggaagagaaaccaaattttacaggatccttc
tattccaagaccaaagccatggttgaggagcttctaaaagaatatgataatgtttgtacc
ctcagagtaagaatgccaatatcatcggatctcagcaacccaagaaacttcatcacgaag
atcacgcgttatgataaagtggtaaacataccaaatagcatgacagtgctagacgagttg
ctaccaatatctattgagatggcaaagagaaactgcagagggatatggaacttcaccaat
ccgggagttgtgagccacaatgagattctagagatgtacagagactatattgaccccaaa
ttcaagtggcagaattttgatcttcaagaacaagccaaagtgatcattgcaccaagaagt
aacaatgagcttgacacaacaaaactgaagaaagaattcccagaattgttatctatcaaa
gagtctatcatcaagtatgtcttcggacctaacaaaaaaacataa
DBGET
integrated database retrieval system
