Lycium barbarum (goji berry): 132638428
Help
Entry
132638428 CDS
T09483
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Module
lbb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132638428
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
132638428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
132638428
NCBI-ProteinID:
XP_060211294
LinkDB
All DBs
Position
4:complement(53040041..53050998)
Genome browser
AA seq
396 aa
AA seq
DB search
MMRKINFFILFPLFIMLLFSLSIAADSMYNVLNYGAKSDGKFDSSKAFISAWTAACASTS
PATIYVPKGTYLLGNAYFNGQTCKCNAITIHIEGTLVAPSDYNVIGKSGNWIKFERVTRV
SIVGGTLDGQGSGLWACKNSGKGCPKGTTYHAFYNSNNVAISGLTSQDSQMFHILFDGCN
NVKLQGVKVSAPGNSPNTDGIHLQSSSDVTILNSQIGTGDDCISIGRGNSNLWLENIACG
PGHGISIGSLGWDMQEPGVDNVTVKTATFTGTQNGVRVKTWARPSNGFIRNILFQHVVMN
NVENPIIIDQNYCPNHEICPEQGSGIKVSDITYQDIHGTSATQVAVKFDCSKTNPCEGIN
LLGVKLSYKDQPAEISCVNAGGKASGLQQPTSCLQI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaaaataaatttctttattcttttcccacttttcatcatgttgttattcagc
ttatcaatagctgcagattccatgtacaatgtcctaaactatggagccaaatccgatgga
aaattcgactcgtcgaaagccttcattagtgcatggactgcagcatgtgcatctactagc
ccagccacaatttacgtgccaaagggaacttaccttcttggtaatgcatatttcaatggt
caaacatgcaagtgtaatgccataactatacacattgaaggcacacttgtagctccttct
gattataatgttattggtaaatctgggaattggattaaattcgagagagttaccagagtt
tccatcgttggtggaaccctagatggtcaaggtagtggtctttgggcatgtaaaaattca
ggaaaaggttgtcctaaaggaaccacttaccacgctttttacaactcaaacaacgttgca
ataagtggattaacttcacaagacagccaaatgttccacattttgtttgatggctgcaat
aatgtgaagttacaaggagtgaaggtttcagctcccggaaacagccccaacaccgacgga
attcatttacagtcatcgtccgatgttaccatcttgaattcccaaattgggactggcgat
gattgtatctcaattggtcgtggcaactccaatttgtggctcgaaaacatcgcctgcggc
cctggccacggaataagcattgggagcttaggttgggatatgcaagagccaggagtagat
aatgtgacagttaaaacagcgacatttactgggactcagaatggtgtgagggtcaaaaca
tgggcaaggcctagcaatggtttcattaggaatattctttttcaacatgtagtcatgaat
aatgttgaaaatcccatcatcatagatcaaaattactgccctaatcatgaaatttgtcct
gagcagggttcaggcatcaaggttagtgatataacgtatcaggacatacacggaacatcg
gctacacaagttgcagtgaaattcgactgtagcaaaacaaatccatgtgaagggataaac
ttattgggcgtgaaacttagttataaagatcagccagctgaaatcagctgtgttaatgct
ggaggaaaggcttctggtctgcaacaaccaactagctgcttacaaatttga
DBGET
integrated database retrieval system