KEGG   Lycium barbarum (goji berry): 132638428
Entry
132638428         CDS       T09483                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb00040  Pentose and glucuronate interconversions
lbb01100  Metabolic pathways
Module
lbb_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    132638428
Enzymes [BR:lbb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     132638428
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix NosD
Other DBs
NCBI-GeneID: 132638428
NCBI-ProteinID: XP_060211294
LinkDB
Position
4:complement(53040041..53050998)
AA seq 396 aa
MMRKINFFILFPLFIMLLFSLSIAADSMYNVLNYGAKSDGKFDSSKAFISAWTAACASTS
PATIYVPKGTYLLGNAYFNGQTCKCNAITIHIEGTLVAPSDYNVIGKSGNWIKFERVTRV
SIVGGTLDGQGSGLWACKNSGKGCPKGTTYHAFYNSNNVAISGLTSQDSQMFHILFDGCN
NVKLQGVKVSAPGNSPNTDGIHLQSSSDVTILNSQIGTGDDCISIGRGNSNLWLENIACG
PGHGISIGSLGWDMQEPGVDNVTVKTATFTGTQNGVRVKTWARPSNGFIRNILFQHVVMN
NVENPIIIDQNYCPNHEICPEQGSGIKVSDITYQDIHGTSATQVAVKFDCSKTNPCEGIN
LLGVKLSYKDQPAEISCVNAGGKASGLQQPTSCLQI
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgatgagaaaaataaatttctttattcttttcccacttttcatcatgttgttattcagc
ttatcaatagctgcagattccatgtacaatgtcctaaactatggagccaaatccgatgga
aaattcgactcgtcgaaagccttcattagtgcatggactgcagcatgtgcatctactagc
ccagccacaatttacgtgccaaagggaacttaccttcttggtaatgcatatttcaatggt
caaacatgcaagtgtaatgccataactatacacattgaaggcacacttgtagctccttct
gattataatgttattggtaaatctgggaattggattaaattcgagagagttaccagagtt
tccatcgttggtggaaccctagatggtcaaggtagtggtctttgggcatgtaaaaattca
ggaaaaggttgtcctaaaggaaccacttaccacgctttttacaactcaaacaacgttgca
ataagtggattaacttcacaagacagccaaatgttccacattttgtttgatggctgcaat
aatgtgaagttacaaggagtgaaggtttcagctcccggaaacagccccaacaccgacgga
attcatttacagtcatcgtccgatgttaccatcttgaattcccaaattgggactggcgat
gattgtatctcaattggtcgtggcaactccaatttgtggctcgaaaacatcgcctgcggc
cctggccacggaataagcattgggagcttaggttgggatatgcaagagccaggagtagat
aatgtgacagttaaaacagcgacatttactgggactcagaatggtgtgagggtcaaaaca
tgggcaaggcctagcaatggtttcattaggaatattctttttcaacatgtagtcatgaat
aatgttgaaaatcccatcatcatagatcaaaattactgccctaatcatgaaatttgtcct
gagcagggttcaggcatcaaggttagtgatataacgtatcaggacatacacggaacatcg
gctacacaagttgcagtgaaattcgactgtagcaaaacaaatccatgtgaagggataaac
ttattgggcgtgaaacttagttataaagatcagccagctgaaatcagctgtgttaatgct
ggaggaaaggcttctggtctgcaacaaccaactagctgcttacaaatttga

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