KEGG   Lycium barbarum (goji berry): 132638429
Entry
132638429         CDS       T09483                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb00040  Pentose and glucuronate interconversions
lbb01100  Metabolic pathways
Module
lbb_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    132638429
Enzymes [BR:lbb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     132638429
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 132638429
NCBI-ProteinID: XP_060211295
LinkDB
Position
4:complement(53434991..53439951)
AA seq 393 aa
MTNFKPMKYTSVSWLLFFCLIIPSCLAFNVVSFGARGDGRTDSTSAFLRAWSAACQSTRQ
PNVYVPRGTYLVRTLSLNGPCRRRIEFRIDGTLVAPKNYYAIGQSEFWIMFYKVSGLTVH
GGTIHAMGQGYWSCRKGGGSCPQGARSIQFMWCNNVVLRGLKSLYSQRVHVGIGYSSNVR
VEYVTIIAPSGSPNTDGIHVQNSRGVTIYGSIIKTGDDCISIGSGSMNVWIERVGCGPGH
GISIGSLGHTWNEPGVANVTVANSVFTKTQNGVRIKSWARPSGGFAKNLMFRNLVMRNVG
NPIIIDQNYCPHNICPRQSSGVKVSQVTFKNVKGTSSTQAVMKFDCSPSNPCSGIRLQDI
KLTYNDRLRRPAFAYCKNARGSHRGKVIPRSCI
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgaccaacttcaaaccaatgaaatatacaagtgtttcatggttactcttcttttgttta
ataataccttcttgtttagccttcaatgttgttagttttggggcaaggggagatggcaga
acagactcaacctccgcgtttcttcgcgcttggtctgctgcctgccaatctactaggcag
cccaacgtgtacgttccacgaggaacgtatttggtaaggacattgagtctaaatggtcct
tgcaggagacgaattgagttccgaattgacggtactctcgttgctccgaagaattattac
gcaattggccagtctgagttctggattatgttctataaggtaagtgggcttacagtgcat
ggaggaactattcatgccatgggtcaaggttattggtcttgtcgaaagggtggaggttct
tgtccacaaggagctaggtcaatacaatttatgtggtgcaacaatgtagtgttaaggggc
ttaaaatcactctacagccaaagagtacatgtggggattggttacagcagcaatgtgaga
gttgagtatgtgacgataatagccccaagtggaagcccaaatactgatggaattcatgtg
caaaactcaaggggggttaccatttatggcagtatcatcaagacaggagatgactgtatt
tctataggctctggctccatgaacgtgtggattgaaagagttggatgtggccctggtcat
ggtatcagcattggaagtttgggacacacttggaatgaacctggagtagcgaatgtgaca
gtagcaaattcagttttcacaaagacgcaaaatggcgttaggataaagtcatgggcaaga
ccaagtggtggctttgccaaaaatctcatgttcagaaaccttgttatgaggaatgttggg
aatcccatcatcattgaccaaaactattgcccccataatatctgccctcgtcagagctca
ggagtgaaggtgagtcaagtcacattcaagaatgtgaaaggaacatcatctacacaagca
gtcatgaaatttgattgcagtccttcaaatccgtgcagtggaattaggttgcaagatata
aagctgacttacaatgatcgtttgagaaggccagcctttgcttattgtaaaaatgcaagg
ggaagccatcgtggcaaagtcattcccagaagttgcatctga

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