Lycium barbarum (goji berry): 132638432
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Entry
132638432 CDS
T09483
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Module
lbb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132638432
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
132638432
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
132638432
NCBI-ProteinID:
XP_060211297
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Position
4:53882939..53885904
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AA seq
397 aa
AA seq
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MANPVMSLILLFLSIVSIFLSSVSMADNAIFNVVQMGAKPNGKTDSTMSFLNAWKAACGS
TKPATIIVPLGRYLVKQAHFRGKCNNKAITFRIDGTLLAPSNYNVIGNAGNYWLLFEGVD
GVSIRGGNLDGRGAALWACKASSNNRPSGATNLAFVNSNNVAITGLTSLNSQMFHIVING
CNKVKVQAVKVLASGNSPNTDGIHVQLSSEVSILKTKIHTGDDCISIGPGTTNLWIQEIA
CGPGHGISIGSLGKDFKEAGVQNVTVKSVIFKNTQNGVRIKSLGRPSTGFVKNIIFQHTT
MINVQNPIVIDQNYCPDNINCPGQVSGVKISDVTYGDIHGSSATEVAVKFDCSKGNPCKG
IKLENVHLTYKNQLPAQASCDNVALTTSGLVQPDNCL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccccgtaatgtctttaattcttttattcctttccattgtttctattttctta
agttctgtatccatggctgacaatgcgatattcaatgttgtacaaatgggggcaaagcca
aatggcaagactgattcaacaatgtctttcttaaatgcttggaaagcagcttgtggctct
acaaaaccagccactattattgtaccactaggaaggtatttggttaaacaagcacatttt
agagggaagtgcaacaacaaagccataacgtttagaattgatggcaccctattggctcct
tcaaattataatgttattggaaatgctggaaattattggcttctttttgaaggtgttgat
ggagtttcaattcgtggtggcaatcttgatggtcgtggggctgctttgtgggcttgcaaa
gcgtcaagcaacaaccgcccaagtggtgccacgaatctggcgtttgtcaactcaaacaat
gtagcaataactgggctaacttcattgaatagtcaaatgtttcatattgtcatcaatggt
tgcaacaaagtgaaggtgcaggctgttaaagtattggcatctggaaacagtccaaatacc
gatggcattcatgttcagttatcatctgaggtctccatattgaaaactaaaatccataca
ggagatgattgcatctcaattggtcctggcaccacaaatttgtggatccaagaaattgct
tgtggccctggccatggaattagcattggaagtttaggaaaggattttaaagaagctggt
gtgcaaaatgtgacagttaaatcagttatattcaagaacacacaaaatggcgtgaggatt
aaatcattgggcagacctagtactggctttgtcaagaatataattttccagcacactacc
atgattaatgttcaaaatccaatcgttatcgatcaaaattactgccctgataatataaat
tgtcctggccaggtttctggtgtgaaaataagtgatgttacgtacggagatatccatgga
agctcagcaacagaagttgcagtgaaatttgattgtagtaagggaaatccatgcaaagga
ataaaattggaaaatgtacatttgacttataagaatcaattaccagctcaagcatcatgt
gataatgttgcactaacaacttctggattagttcaacctgacaattgtttgtaa
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