KEGG   Lycium barbarum (goji berry): 132638444
Entry
132638444         CDS       T09483                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb00040  Pentose and glucuronate interconversions
lbb01100  Metabolic pathways
Module
lbb_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    132638444
Enzymes [BR:lbb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     132638444
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim NosD Pectate_lyase_4
Other DBs
NCBI-GeneID: 132638444
NCBI-ProteinID: XP_060211302
LinkDB
Position
4:68583760..68586945
AA seq 392 aa
MANLIISCIIVLFSSVFLFMELSNAATTYNVLSFGAKPNGQTDATEPFLKAWGAACSSVE
PATIYVPRGRYLIKSATFRGPCKNRITVKIDGTLVAPLDYWEIGNSGYWLVFIKVNGISV
IGGNFDAKGAAFWECRKSGKNCPVGARSITFNWANDVEISGLLSINSQVTHLVINSCNNV
MVRNVRMIAPDQSPNTDGIHVQSSTGVTITGCRIKTGDDCISIGPGTRNLWMEKILCGPG
HGVSIGSLGRNYEEDGVQNVTLTYSIFTGSDNGLRIKSWARPSTGFVNSINYRNIVMKYV
DNPIIIDQNYCPNNEDCPGQTSGVKISEVTYKNIQGTSTTQVAMKFDCSPSNPCERIQIQ
DIKLTHMNKKAKSFCKNVQGIKKGVILPDSCI
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggctaacctgataatatcttgcattattgtcctcttctcttctgtatttttattcatg
gaattatcaaatgcagcaacaacttacaatgtgctaagctttggtgcaaaaccaaatggc
caaactgatgcaactgagccatttctaaaggcatggggagctgcatgcagctcagtggaa
ccggcaaccatttacgttccacgggggcgttatctaataaaatcagcaacatttaggggg
ccatgtaaaaatagaattactgtaaagattgatggaacacttgtggcaccattggattat
tgggaaattggcaactcaggctactggctagtgttcattaaggttaacgggatttcggtc
attggtggaaattttgatgctaaaggagctgccttttgggaatgccggaagtcaggcaag
aattgcccagttggagctaggtcgataaccttcaattgggctaatgatgttgagataagt
ggcttactatcaatcaacagccaggtaacacaccttgtgatcaatagctgcaacaacgtg
atggttcgaaatgtaagaatgatagccccagaccagagcccaaacacagatggcatacat
gttcaatcatcaaccggtgttactatcactggttgtagaatcaaaactggagatgactgt
atatctattggtcctggcacaagaaacctttggatggagaaaattttatgtggacccgga
catggtgttagtattggaagtcttggaaggaattatgaagaagatggagttcagaatgtg
acattgacttactctatattcacaggatctgataatggattaagaataaaatcttgggca
agaccgagcaccggttttgtcaacagcattaattatcgtaacatagtcatgaagtacgtt
gacaatccaatcatcattgatcaaaattattgccccaacaacgaagattgtccaggacag
acatctggtgtaaagattagtgaagtaacatataaaaatatacaagggacgtcgacaact
caagtagctatgaaatttgactgcagcccgagcaatccatgcgaaagaatccaaatacaa
gacataaagctcactcatatgaacaaaaaggcaaaatcattttgcaagaacgttcaagga
attaagaaaggagtcattttgcctgatagttgtatataa

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