Lycium barbarum (goji berry): 132638745
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Entry
132638745 CDS
T09483
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Module
lbb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132638745
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
132638745
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
132638745
NCBI-ProteinID:
XP_060211503
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Position
4:141310902..141333284
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AA seq
405 aa
AA seq
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MDLKFKLVHFALVVLFLAHLGESQNATFDITKYGANSNADISEAVLKAFQEACQATSPST
IVIPKGTFQMNQVKLEGPCKGPIELQIQATLKAPSDPNQLKTGEWLTVNKLDGFTMSGGG
ILDGQGKAAWECKESKKCNKLPNNLSFNSLTNSIIKDITTLDSKSFHVNVNQCKNLTFLH
FNVSAPAGSPNTDGIHISRSSSVNVTDSSFATGDDCISIGDETEQLYITKVTCGPGHGIS
VGSLGGNPDEKPVVGVFVKNCTFISTDNGVRIKTWPASHPGVVSDIHFEDIIVQNVSNPI
VIDQVYCPAGKCNKDLPSQVKISKVTFQNIKGTSRTQAAVSLLCSKGTPCEGVEVGDIDI
TYSGKEGPAKSSCENIKPSLKGKQNPQVCTAAASPAAAPAASSSS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaattcaagttggtgcattttgcattggtggtgttatttctagcacacctt
ggggaatctcaaaatgcaacttttgatataacaaagtatggtgccaatagcaatgctgat
attagtgaggccgttctgaaagcttttcaagaggcatgtcaagctacaagcccaagcacc
attgtgatcccaaagggaacattccaaatgaaccaagtgaaactagaaggcccatgcaaa
ggcccaattgaacttcaaatccaagccactttgaaagctccttcagatcctaaccaactc
aagactggtgaatggttgactgtcaacaaacttgatggattcaccatgtctggtggtggg
atccttgatggtcaaggtaaagctgcatgggaatgcaaggagtccaaaaagtgcaacaag
cttcccaataacttgagcttcaactccctcacaaattccataatcaaggacataactaca
ctggacagcaaatcattccacgtgaacgtgaatcaatgcaagaacttaacgttcctccac
ttcaacgtcagtgctccagctggaagccccaacactgatggcatccacatctcgaggtcg
agctctgtgaatgttacagactccagttttgctaccggagacgattgcatttccattggc
gatgaaacggaacaactttacatcactaaggtcacttgtggacctggccatggtattagt
gttggtagccttggtggaaatcctgatgaaaagccagttgttggtgtttttgttaagaat
tgcactttcattagcactgacaatggtgttaggattaagacatggcctgcttctcaccct
ggtgttgtctctgatattcactttgaggatatcattgtgcaaaatgttagcaaccctatt
gtcattgatcaagtttactgcccagctggcaaatgcaacaaagatttgccttcacaagtg
aagatcagcaaagtgactttccaaaacataaagggtacatcaagaactcaagctgcagta
tcacttctttgcagtaaaggtaccccatgtgagggtgttgaagttggtgacattgacatc
acatacagtggaaaagaaggtccagcaaaatcaagttgtgaaaatattaagccaagttta
aaaggaaagcaaaatccacaagtttgcactgctgctgcttcccctgctgctgctcctgct
gcttcttcgtcttcttaa
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