Lycium barbarum (goji berry): 132640076
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Entry
132640076 CDS
T09483
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132640076
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132640076
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132640076
03036 Chromosome and associated proteins [BR:
lbb03036
]
132640076
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
132640076
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
132640076
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
132640076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Herpes_glycop_H
Motif
Other DBs
NCBI-GeneID:
132640076
NCBI-ProteinID:
XP_060212485
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All DBs
Position
5:1977521..1982200
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AA seq
476 aa
AA seq
DB search
MFKIIKRGKKSSKGEAIEPPIPTSVPNAPVDHASRIATSGVTSSQPVTLANATPDPSVIE
VLPLLKEVALSERHVLFIRKLQICCVQFDFSDTVKCARQKEIKRQTLTELVDLVQSGSCK
MNEIMQEELIRMISTNLFRCLPPASHENTGSEGIEEEDDMYLEPSWPHLQLVYELFLRYV
LSSEMDTKVAKRYLDHSFVLKMLDLFDAEDPRERDYLKTILHRIYGKFMVHRPFIRNGIN
NVFYRFIFETERHNGIGELLEILGSVINGFALPMKEEHKLFLVRALIPLHKPKCVSAYHH
QLSYCITQFVEKDYRLADIVIRGLLKYWPLTNCGKEVLFIGELEEVLEGTQPAEFQRCLV
PLFKQLGRSINSPHFQVAERALFLWNNEHIVDLIAQNRRAILPIIFEPLERNMYGHWNQA
VHGLTSNVRRMFLEMDSEFFEECEKEYNERAAGATGLVEQRKLNWKKLEEAAALVG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagataataaaaagagggaagaaaagctccaaaggggaggctattgagcctcca
ataccgacgtcggtgcctaatgcacctgtcgatcacgcctcgcgaatagcgacgtcaggt
gtgacatcatcacagcctgttactttggcaaatgccacaccagatcctagtgtgattgag
gtattgcccttattgaaagaagttgcactatccgaacgccatgttttgtttatccggaag
ctccaaatttgctgtgtgcaatttgatttctcggatacggtgaagtgtgctagacaaaag
gagatcaagaggcaaacgctaaccgagcttgttgatttagttcaatcgggttcgtgtaaa
atgaatgagataatgcaggaagagttgattaggatgatatccaccaaccttttccggtgc
cttccgcctgcttcccatgaaaataccgggtcggaaggtatagaggaagaggacgatatg
tatttggagccatcgtggccacatttgcaattagtgtatgagttatttttaaggtacgtg
ctgtcgtccgaaatggataccaaggttgcgaaacgatatcttgaccattcgtttgtgttg
aaaatgctcgacttatttgatgcggaggatcctagagagcgggattatttgaaaactatt
cttcaccgcatatacgggaaattcatggttcataggccatttataaggaatggtataaac
aatgtattctacaggtttatatttgagacggagaggcataatggtatcggtgaattgcta
gagattcttggaagtgtaataaacggttttgctctgccaatgaaagaagagcacaagttg
tttcttgttcgggcactcattcctctccacaagcctaaatgtgtttctgcatatcaccat
cagttgtcctactgcatcactcagtttgttgagaaagattacagattggcggatattgtt
atcagggggctgctaaaatactggccacttactaattgcggaaaggaggttctttttatt
ggtgaactggaagaagttctggaaggtacacagcctgctgaatttcagcgctgtttggtt
cctcttttcaagcaacttggacgtagcatcaatagtccccattttcaggttgctgagaga
gctctgttcctatggaacaatgaacatatagtagatttgatcgcgcagaatcgacgtgca
attttgccaataatctttgagccactagaaaggaatatgtatggccactggaatcaggca
gtccacgggctgacctccaatgtccggagaatgttcttggagatggattcagaatttttc
gaggagtgtgaaaaggaatacaatgaaagagcagccggtgccaccggccttgtggagcag
cgcaaacttaattggaagaaattggaagaagctgctgcactggtcgggtag
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