Lycium barbarum (goji berry): 132640117
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Entry
132640117 CDS
T09483
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132640117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132640117
03012 Translation factors [BR:
lbb03012
]
132640117
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132640117
Translation factors [BR:
lbb03012
]
Eukaryotic type
Release factors
132640117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
She2p
Motif
Other DBs
NCBI-GeneID:
132640117
NCBI-ProteinID:
XP_060212538
LinkDB
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Position
5:complement(2547029..2553122)
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AA seq
437 aa
AA seq
DB search
MADGQENDKNIEIWKMKKLIKALQSARGNGTSMISLIIPPGDQISRITKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLLLYTGTIVTDDGKEKKVTFDLTPFKPIN
ASLYLCDNKFHTEPLGELLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGEAGFNQAIELSAEILANVKFIQEKRLIGKFFEEISQDTG
KYVFGVDDTIKGLEMGAVETLIVWENLDINRYVLKNSVTNEIVIKHLNKLQEGDNSNFKD
PATSAELEVQDKMPLLEWFANEYKTFGCSLEFVTNRSQEGSQFCRGFGGIGGILRYQLDL
RSFDEPSDEGEYFEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggccaagaaaacgataagaatattgaaatatggaaaatgaaaaaattaatc
aaagccctacaatctgccagaggaaacggcacgagcatgatctctcttatcataccccct
ggtgatcagatatctcgtattaccaaaatgcttgcagaagaatacggtactgcatcaaat
attaagagcagagtaaaccgtcagtctgtgctcggtgcaataacatctgcccaacaaagg
cttaaactttataacaaagttcctcctaatgggttgctgctttatacgggaactatagtg
acggatgacgggaaggaaaaaaaggtcacgttcgatcttacgccttttaaacccataaac
gcgtctttatacttatgtgacaacaagtttcataccgaacctcttggtgaactattggaa
tctgatgagaagtttggtttcatcgtcatggacggtaacgggactcttttcgggacctta
agtggcaacacacgagaagttcttcataagttcacggttgacctcccgaagaagcacgga
agaggaggtcaatcggctcttcgtttcgctcgtctgcgaatggagaaacgccataattac
gtgaggaagacggcagagctcgctactcaattctatattaacccggctactagccagccg
aatgtatccggactaatacttgcggggtctgctgattttaaaaccgagctaagtcaatcg
gatatgtttgacccgcgcttacaagcgaagatacttaacgtggtcgacgtgtcgtacggt
ggggaagccggattcaatcaggcgatcgagctgtctgctgagattctcgctaatgtgaag
tttatacaagaaaagcggttgatagggaaattctttgaggaaatcagtcaagatactgga
aagtatgtatttggcgtggatgacacaataaaaggtttggagatgggagctgttgaaacc
ctaattgtgtgggaaaatcttgatataaaccgttacgtactgaaaaatagtgtgactaat
gagattgtcattaagcacttaaacaagttacaagagggtgataatagtaacttcaaggat
cctgccacgtcagctgaattggaggttcaggacaaaatgccgctgctggagtggtttgcc
aatgagtacaaaacttttggttgttcgctcgagtttgtgactaaccggtctcaagagggg
tcacagttttgcagaggatttggtggcattggaggaattcttcggtaccagcttgacctg
cgttcgtttgacgagccatctgatgaaggagaatactttgaggattctgattaa
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