Lycium barbarum (goji berry): 132640125
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Entry
132640125 CDS
T09483
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132640125
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132640125
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132640125
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132640125
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132640125
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132640125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
MATH_2
MATH
TRAF_BTBD17
TRAF-mep_MATH
Motif
Other DBs
NCBI-GeneID:
132640125
NCBI-ProteinID:
XP_060212552
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All DBs
Position
5:2675235..2720726
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AA seq
713 aa
AA seq
DB search
MSLLPTPMDIRLKKKQEENEQKRMEKVEACLHTIIKVAREEDLGEQIGKEIYFDLVDHDK
VRTFHIEKQMSFIQLKEEVSKAFGIPVQFQRYWLWAERKNHTYRPNRALTAEEEIQLVGQ
LREVSNEENNAELKLFLEVELCLDLRPFPPQEKTKEDVLLFFKLYDPLIEKIRYVGRLFV
KESGKPLEILTKLNELAGFSPDEEIELFEEIKFEPNVMCERIDSNMSFRDSVIGDGDIIC
FQKSLRNQCSEQYRFPEVPSYLEYMHNCQVRSRKEQEEKEQKRKEKEEARLYTIIKVARD
EDLGEQIGKDIYFDLVDHDKVSTFRILKQMPFTQFKEEVAKTFGTPVQFQRYWLWEKREN
CTYRPNRALTAQEEIQAVGELREVSNKWNNDELKLFLEVDLCLDLRPLSQPGKMIKEEIL
LFFKLYDPLKEKIRYVGRLFVKGSGKPLEILPRLNELAGFSPDEEIELFEEIKFEPNMMC
EQIDSMLSFRDCQLEDGDIICFQKSLRNQCGEQYRFPVVPSFLKYVHNCQPEEHKVIVPT
SDFPTKGPQTIEVAPVDTARTVDDPVSFCFTWTINNFSRLNVEKLYSDAFCVGGYEWRIL
LFPKGNKKRNITDHLSMYLDVADAATLPDGWSIYARFSLAVLHQIHDKFTVRKKTRHHFN
EGDSHCGFTCFMPLTELNGPGRSYLVDDKVVLQANVTVAKSYRSLLDCKLIGA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccttcctacaccgatggatataagactaaagaaaaagcaagaagaaaatgaa
caaaagagaatggagaaagtagaggcttgtctccacacaatcatcaaggtagctcgtgaa
gaagacctcggtgaacaaattggaaaggaaatttattttgatcttgtggatcatgataaa
gtgcgtacatttcatattgagaaacaaatgtcgtttattcaattaaaggaggaagtttct
aaggcatttggtataccggtgcaatttcaacggtactggctgtgggcagaacgcaagaac
catacttatcggcctaatcgtgcattgacagctgaagaagaaattcaattagttggccaa
ctgagagaggtttcaaatgaagagaataatgctgagctaaaattatttctggaagtagaa
ttatgtctggatttgcgaccttttcctccgcaagagaagaccaaggaagatgtcctcctc
tttttcaaactttatgacccattgatagagaagataaggtatgtcggacgactttttgta
aaagaaagtggcaagccactggagatattaacaaagctaaatgagttggctggcttttcg
cctgatgaagaaattgaactttttgaggaaataaaatttgaacccaatgtcatgtgtgaa
cgcatcgacagtaatatgagttttcgtgactctgtgataggagatggggatataatttgc
tttcagaaatcccttcgaaatcaatgcagtgaacaatatcgctttcctgaggttccttca
tatttggagtacatgcacaattgccaggtgagatcgaggaaagagcaagaagaaaaggaa
caaaaaagaaaggagaaagaagaagctcgtctctacacaatcatcaaggtagctcgtgat
gaagacctcggtgaacaaatcggaaaggatatttattttgatcttgtggatcatgataaa
gtgagcacttttcgtattctgaagcagatgccatttactcaattcaaggaggaagttgct
aaaacatttggtacaccggtgcaatttcaacgttactggctatgggaaaaacgcgagaac
tgtacgtatcggcctaatcgtgcattgacagctcaagaggaaattcaagctgttggtgaa
ctgagagaggtttcaaacaaatggaacaatgatgagctaaaactttttctggaagtagac
ttatgcctggatttgcgacctttatctcaaccagggaagatgatcaaggaagaaatcctt
ctatttttcaaactttatgaccctctgaaagagaagataaggtatgttgggcggcttttt
gtaaaaggaagtggaaagccgctggagatattaccaaggctgaatgagttggctggcttt
tcccctgatgaagaaattgaactctttgaggaaataaaatttgaacccaatatgatgtgt
gaacagattgacagtatgctgagttttcgtgactgccagctagaagatggggatataatt
tgctttcagaaatcccttcgaaatcaatgcggtgaacaatatcgctttcctgtggttcct
tcattcttgaagtacgtgcacaattgccagccagaagagcacaaagttattgttcctact
tctgattttcctactaagggacctcagacgatcgaagttgcaccagtggacacggcacgc
acggtggatgatccagtgtcattctgctttacatggactatcaacaatttttcaaggttg
aatgtggagaagttgtactctgatgctttctgtgttggaggatatgaatggaggatactg
ttattcccaaaagggaacaaaaaaaggaacattacagaccatttatcaatgtatttagat
gtggcagatgctgcaacattgcctgatggttggagtatatatgcacggtttagcttagct
gttcttcatcaaattcatgacaagttcacagtgagaaaaaagactcgacatcattttaat
gaaggggacagtcactgcggtttcacatgtttcatgcctcttactgaactaaatggtcct
ggaagaagttatcttgtggatgataaagtcgtacttcaagctaatgttaccgtggctaaa
agttatcgatcgctgcttgactgtaaattgattggcgcatga
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