Lycium barbarum (goji berry): 132640143
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Entry
132640143 CDS
T09483
Name
(RefSeq) cysteine desulfurase 1, chloroplastic
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00450
Selenocompound metabolism
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
132640143
Enzymes [BR:
lbb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
132640143
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
132640143
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
132640143
NCBI-ProteinID:
XP_060212587
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Position
5:complement(3015866..3022982)
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AA seq
474 aa
AA seq
DB search
MITTTTTPMEGAILKLPIGLRTVNRVTNRSSTSLRWRSRPLHVSASAASTSTPLVDDPKL
GPGSLGHITRPDFPILHQEINGSKLVYLDNAATSQKPTAVIKALQNYYEAYNSNVHRGIH
YLSAKATDEYESARQKVANFINAGATEIIFTRNATEAINLVAYSWGLSNLKPGDEIIITI
AEHHSAIVPWQIVAQKTGAVLKFVNLTEDEVPDVGQLRDILSRRTKLLVMHHVSNMLASV
LPMDEVISWAHDVGAKVLVDACQSVPHMVVDVKNLDTDFLVGSSHKMCGPTGVGFLYGKS
EILSGMPPFLGGGEMIADVYLDHSTYAEPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMQR
IHDYEMELGNYLYDRLSSVSDVRIYGPAPSRTVKRAALCSFNVKDVHPTDIATFLDQQHG
VAIRSGHHCAQPLHRHLGISSSARASLHFYNTKDDVDRFIEALKDTIDFFTSFK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgataacaacaacaacaactccgatggaaggcgcaattctcaaactaccaatcggtctc
cgaacggttaaccgggtcaccaatcggagctccacttcgctcaggtggcggtcccggccg
ttacacgtgtcagcttcagcagcatctacttctactccattagtagatgacccgaaactt
ggacccggttcgctcgggcatattacccgacccgacttcccaatacttcaccaggaaata
aatggctcaaagcttgtgtatttggataatgctgcaacttcccaaaagccaacagctgta
atcaaggctttgcagaattattatgaagcttacaattccaatgtccataggggcattcat
tatttgagtgcaaaggcgacagatgagtacgagtcagcaagacaaaaggtggcaaatttc
attaatgccggagctacagaaatcatttttacaagaaatgctactgaagctatcaactta
gtggcttactcttggggactctcaaacttgaaaccaggagatgagattataatcacaata
gctgaacatcacagtgcaattgttccttggcaaattgttgctcaaaagactggtgctgtc
ctgaagtttgtaaatttgacagaggatgaagttccagatgtagggcaattaagagacatt
ctctcaaggaggacaaagcttctggtcatgcatcatgtctcaaatatgttagcttctgtt
cttccaatggatgaagtcataagttgggcacatgatgttggagcaaaagtgcttgtagat
gcttgtcaaagtgtcccacacatggtggtcgatgttaagaatctagacactgattttctt
gttggttcctctcataagatgtgtgggcctacaggcgttggattcttgtatggcaagagc
gagatcctttctggcatgcctccgttccttggtggtggtgaaatgatagctgatgtatat
ttggatcattccacttatgctgaacctccttctagatttgaggctgggactcccgcaatt
ggagaagcaattgggcttggagctgcaattgattatctgtcggaaattggcatgcaacgg
attcatgattatgagatggagctgggtaattatctgtatgatcgcctctcttctgtatct
gatgttcgtatttacggccctgcaccttcacgaactgttaagcgagcagctctttgttct
ttcaatgttaaagatgttcacccaacggatatcgcgactttccttgatcaacagcatggt
gtggctattagatcaggtcaccattgtgctcagcccctccatcgccatttggggatcagt
tcaagcgcacgtgctagccttcatttctacaacactaaagacgatgttgaccgattcatc
gaggcgctcaaggacactatcgactttttcacttctttcaaatga
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