Lycium barbarum (goji berry): 132640177
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Entry
132640177 CDS
T09483
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132640177
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
132640177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
tRNA_Me_trans_M
Motif
Other DBs
NCBI-GeneID:
132640177
NCBI-ProteinID:
XP_060212639
LinkDB
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Position
5:complement(3584350..3591149)
Genome browser
AA seq
1308 aa
AA seq
DB search
MKNLKILKEEFSKLQLHSQDEVISFAAFDMERNRLFLASSSNFIYTLHLPSSSHNAGAWN
SISDNLIDLEPGDFITSMDYLMEKEALIIGTSYGLLLLYTADDNMTEIVGRLEGGVKCIS
PSPDGDLLGVITGFGQILMMTPDWDVLYEMALDDLPEDIDVHEDTYSSNYSSESPISWRG
DGKYFATLSRVNNSQLLHKKLKIWERDSGALHSVSESNPFMGSTLDWMPSGAKIAAVYDR
KEDRKCPSIVFFERNGLQRSSFCINVETGATVESVKWNCNSDLLAAVVRGEKYDSLKIWF
LSNNHWYVKQDIRYTKGDKVRFMWDPIKPLQLVSWTIGGHITTYNFVWNTAVMNNSVALV
IDDSKILISSLSLSLIPPPMYLFCLNLPSAIQSMAFCSKSSMNHLAASLADGRLCVIELP
AIDCWEELEGKEFDVEAASFDSGYKSFIHLAWLDSHKLLGVSHNQISNAIKESSKDELSV
YCLQEIELVCSEDRIPSSVTCSGWQAKVLNRLSLEGTVIGIVPDQGNGYSAYVQFDGGKV
FEYAFKLADARGLHQKRDDMSFPSSCPWMNLVQIGGCLPQKALLFGLDDSGRLVVGGRTL
CNNCSSFSFYSNSADQTVTHLILATKQDLLFIIDISDILKGELEVKYGNFLPVFKHRKGD
DERNYIQIWERGARIAGVLHGDESAIIIQTVRGNLECIYPRKLVLASIINALIQGRYKDA
LLMVRRQRIDFNVIIDHCGWQNFVQSAAEFVKQVNNLSYITEFVCSIKNENIMETLYRNY
ISLPHDSETKVLEHGDSKIHSVLLAIRKALEEHVAESPARELCILTTLARSDPPALEQAL
ERIKNIREKELSGSDELRRELYPSAEEALKHLLWLSDSEAVFEAALGLYDLNLAAIVALN
SQKDPKEFLPYLQELENMPIVLMRYNIDLRLQRFEAALQHIVSAGDAYFEDSMILMKKNP
QLFPSGLRLVTDSVKRNQVLEAWGDHLSFTKCFEDAAATYLCSSCLDKALKAYRECGNWG
GVLTVAGLIKLGKEEVLQLAQELCEELQALGKPGDAAKIALEYCTDVSAGISFLVSAREW
EEALRIVFLHRRDDLVLEVTTASLECASSLGSEYEEGLEKVGKYLTRYLAVRQRRLLLAA
TLQSEERSINDLDDDTASETSSNFSGMSAYTLGTRKGSAASINSKASTKAREMRRQRNRG
KIRAGSPGEEMGLVDHLKGMSLTTGAKRELKSLLICLVMLQKEDIARKLQHVATNFQLSQ
MAAVKLADEAMSNDRINEHFYVLENYIPKIKEEMQHSELFSWQSKVLI
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttgaagatattgaaagaagaattctcgaagcttcaattacactcccaagat
gaagttatcagctttgcagcatttgacatggaacgcaatcgcctattcttagcttcctct
tcaaacttcatctacactttacaccttccatcttcttctcataatgcaggagcttggaat
tccatatcagataaccttattgatttagagcctggggatttcattacttccatggattat
ttaatggaaaaagaagcattgattattgggacttcgtatggactgctattgctgtatact
gcagatgataatatgacagaaatagttggccgattagagggtggagtaaagtgtatttca
cctagtccagatggagatcttcttggtgtaattactggttttggacagatattaatgatg
acacctgactgggatgttttatatgagatggcacttgatgatctgcctgaagatattgac
gtacatgaagatacttactcttccaattattcgtcggagagcccaatttcatggcgggga
gatggcaaatactttgcaacattaagcagggtgaataattctcagctcttgcataagaag
cttaaaatctgggaacgcgactcaggagcactccattctgtttcagaatcaaatcctttc
atgggatcaactttggattggatgcccagtggagccaaaattgctgcagtttatgaccga
aaggaagacagaaaatgcccatctatagttttctttgagaggaatggtttacaaagaagc
tcattttgcatcaacgtagaaactggtgctactgtagaatctgtgaagtggaattgtaac
tcagaccttctagctgctgtggtcagaggtgaaaagtatgactctctgaagatctggttc
ttaagtaacaatcactggtacgtaaagcaagatatcagatacacgaagggtgataaagtc
agattcatgtgggatccgataaagcctctacagttggtttcttggactattggtgggcat
atcacaacctacaactttgtctggaatactgctgtcatgaataactcagtggcacttgta
attgatgactccaagatactaatatcctctctttctctatctctcatcccaccacctatg
tatctcttttgtttgaatcttccctctgccattcagagtatggcattttgctctaaaagt
tctatgaatcacctggctgcatccttggcagatggcagattatgtgttatagagcttcct
gcaattgattgttgggaggagctagaaggtaaagagtttgatgttgaggctgcttctttt
gattcaggatataaatctttcattcaccttgcatggttggattcacataagcttcttggt
gttagccataatcaaattagcaacgcaataaaagagtcctctaaggatgagctttctgta
tattgccttcaagaaattgagcttgtgtgttctgaagatcgtattcctagttcagtgaca
tgctctggttggcaagctaaagttttgaatagattatctcttgaaggtactgtaataggt
atagttcctgaccagggaaacggctactcagcgtatgtccagtttgatggcgggaaagtg
tttgagtatgcgtttaagttggctgatgccagagggcttcatcagaaacgtgatgatatg
agttttccttcatcttgcccctggatgaatcttgtgcaaattggaggctgcttgccgcag
aaagctttgctttttggtctcgatgacagtggtaggttggttgttggtggaaggacattg
tgcaacaattgcagcagtttctctttctactcgaattctgctgatcagactgtcacccat
ttgattcttgcaactaagcaggatttactgtttatcatcgatattagtgatatcctgaaa
ggagaactggaggttaagtatgggaacttcctgcctgttttcaagcacagaaaaggagat
gacgaaagaaactatattcaaatatgggaaagaggtgccagaattgcaggtgttctgcac
ggcgatgagtctgctatcataattcaaacagttcgagggaatcttgagtgcatctacccc
agaaaattggtcctagcctcaataatcaatgctttgatccaggggcgttacaaagatgca
ttactcatggtaagaaggcaaagaattgatttcaatgttattattgaccattgtggttgg
caaaactttgttcagtcagctgctgagtttgtcaagcaggtgaacaatctaagttatata
actgaatttgtctgctcaataaagaatgaaaacatcatggagacactgtacagaaactat
atatccctacctcatgacagtgaaactaaagttttagaacatggcgatagcaagatccac
tctgtcctgctggccataaggaaggctctcgaggagcatgtagcggaaagtcctgcaagg
gaactttgcattttgaccactttagctcgaagtgaccctccagctcttgaacaagcttta
gagagaataaaaaatatccgagaaaaggaattgtcgggttcagatgagctgagaagggaa
ctctacccttctgctgaggaagctttaaaacatcttttgtggttgtcggattcagaggca
gtttttgaagctgcgttaggtctttatgatttgaaccttgcagctatagtcgccttaaat
tcacaaaaggatccgaaagaatttcttccctatctgcaagaactagaaaacatgcctata
gtattaatgcgatacaatatagaccttagattgcagaggttcgaggctgcgcttcagcac
attgtttctgcaggagatgcttactttgaggattcgatgatccttatgaagaaaaatcct
caacttttcccctcgggactccgactagtcaccgactctgtcaagagaaaccaagtactt
gaggcctggggagatcatcttagtttcacaaaatgcttcgaggatgctgctgcaacatat
ttgtgttcttcttgtttggataaagctttgaaggcttatcgtgagtgtggtaattggggt
ggggttctgacagtagctggtctcattaaacttgggaaggaggaagtattgcaactagca
caggagctttgtgaggaactccaagcacttggtaaaccaggggatgctgcaaaaatagct
ttggagtattgcacagatgttagtgctggtattagtttcttggtcagtgcaagggaatgg
gaagaagctttgagaattgtatttcttcacaggagagatgatctggtcctggaagtgacg
actgcatcacttgagtgtgccagctcattgggtagtgaatatgaggaaggtttggagaaa
gtgggaaagtacttgactcgctatttagctgttcgacaaaggagattattacttgctgca
acgctacagtcggaggagcgatcaataaatgaccttgatgatgatactgcttctgaaacc
agtagcaatttcagtggaatgagtgcatacaccttggggacaagaaagggatcagctgca
tctataaactccaaagctagcacaaaagcgagagaaatgagacgtcaacggaatagaggg
aaaatacgtgccggcagtcctggtgaggagatgggtttggtagatcatttaaagggtatg
tctctgactactggagctaagcgtgaacttaaatctctcttgatatgccttgtaatgctg
caaaaggaagatattgccaggaagctgcaacatgttgctacaaattttcaactgtctcaa
atggcagctgtaaaattagctgatgaggccatgtcaaatgatagaatcaatgaacatttc
tatgttctggagaattacatcccgaaaataaaggaagaaatgcagcactcagagcttttc
tcttggcagtcaaaagtattgatttga
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