Lycium barbarum (goji berry): 132640214
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Entry
132640214 CDS
T09483
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00071
Fatty acid degradation
lbb00280
Valine, leucine and isoleucine degradation
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
lbb01212
Fatty acid metabolism
Module
lbb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
lbb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
132640214
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
132640214
Enzymes [BR:
lbb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
132640214
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Gene cluster
GFIT
Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Kdo
Choline_kinase
Fructosamin_kin
EcKL
Motif
Other DBs
NCBI-GeneID:
132640214
NCBI-ProteinID:
XP_060212697
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All DBs
Position
5:4554726..4564883
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AA seq
829 aa
AA seq
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MANRTSDLVGRVDPAQSFDTEALLRYASANIDGFPTNISNFTISQFGHGQSNPTYLIEVR
SGTFAKKYVLRKKPPGKLLASAHAVEREYEVLHALGTHTGVPVPKVFCLCTDSSVIGTPF
YIMEYLEGRIFIDPKLPDVAPKRRRDICRAVSQALASLHSANVDAIGLGNYGKRKDYCKR
QVERWAKQYLLSTGEGKSGRNPKMLELVDWLRRHIPLEDSLGGTAGLVHGDFRIDNVVFH
PTEDRVIGVLDWELSTLGNQMSDVAYSCLHYYENISLEDVEENDGFERSSFPDGIPSLPE
YLADYCSTAGRPWPVDQWKFYVAFSLFRGASIHAGVHCRWIMGNASGGERARFAGEKADS
LIKTAWSFIQRKSVLPLHPPSETTKEDHIRPFLSESQIQATPTSGKFVPSEKVQDLRDKL
IKFMEDHIYPKESEFYKLAQSSMRWTIHPDEEKLKELAKNEGLWNLFIPFDSAARARKLI
FGSRNDALGENKFDRLLGAGLSNLEYGYLCEIMGRSVCAPQIFNCGAPDTGNMEVLLRYG
NEEQMKEWLVPLLEGKIRSGFAMTEPQVASSDATNIECSIKRHGDSYIINGKKWWTSGAM
DPRCKLLIVMGKTDLTALKHKQQSMILVDINTPGITIKRPLTVFGFDDAPHGHAEIFFEN
VRVPANSILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMQMMVQRALARRVFGKLIA
EQGSFLSDVAKCRIELEKTRLLVLEAADQLDCLGNKEARATLAMAKVAAPNMALMVLDTA
MQVHGAAGLSGDTVLAHLWATARTLRIADGPDEVHLGTIAKTELRRSKL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcggacttcggatcttgttggtcgggtcgacccggcccagagttttgacact
gaagcactccttcgttatgcatctgctaatattgatggcttccctacaaatatatccaat
ttcactatttctcagttcgggcatggccaatcaaatcctacttatctcattgaggtccgt
tccggaacctttgcaaagaaatacgtgttgagaaaaaaaccgcctggaaagttgctggca
tctgctcatgctgttgagagagagtatgaggttctacatgcactaggtactcatactggg
gttccagtccccaaagttttttgtttgtgtacagattcaagtgtgattgggactccattt
tacattatggagtatttggaaggacgtatatttatagacccaaaactacctgatgtagcg
cctaagaggaggagggatatatgtcgtgctgtttctcaagcattggcctctcttcactct
gctaatgttgatgcaatcggtttaggtaactatgggaagcggaaagactactgtaagaga
caggtggagaggtgggccaaacaatatcttctatctaccggtgagggcaagtccgggaga
aaccctaaaatgttagagctggttgattggctgcgacgacatattccccttgaagattcc
ttagggggaacagctggtttagtacatggtgactttaggattgacaacgttgtgtttcat
cccactgaggacagagtcataggagttcttgattgggagttgtcgacgttgggtaatcag
atgtctgatgttgcctacagctgcttgcactactatgagaatatttccttagaagatgta
gaagagaatgatggctttgagcgtagcagcttccctgacggaataccttctcttccagaa
tatcttgcagattactgctcaacagctggaagaccttggccagttgatcaatggaagttc
tatgttgccttttctctgtttcgtggggcttcaatacatgctggtgtacactgcagatgg
atcatgggtaatgcttctggaggtgaacgtgcccggtttgctggggaaaaggctgattcc
ctcatcaaaactgcatggtcatttattcaaagaaaatctgtgctccctcttcacccacca
tctgagacaactaaagaggatcatatcaggcctttcttaagtgagagccaaattcaagca
acgcctacgagtgggaaatttgtgcctagtgagaaagttcaagatctgagagacaaattg
ataaagttcatggaagatcacatatatccaaaggaaagtgagttttacaagcttgcacag
tctagcatgcggtggacaattcacccagatgaggagaagttaaaggagctggcaaaaaac
gaaggcctgtggaatctgtttataccatttgatagtgctgcacgggcaagaaaactgatc
tttggcagcagaaatgatgctctaggtgaaaacaagttcgaccgcttgttaggtgctggc
ctttcgaaccttgagtatggatatctctgtgaaattatgggccgttctgtttgtgcgcca
cagattttcaactgtggggcgcctgatacaggaaatatggaggtattacttcgctatggg
aatgaggaacagatgaaggaatggcttgttcccttgcttgaggggaagatacggtctggt
tttgcaatgacagagccacaagttgcttcctcagatgccaccaatatagaatgttccatc
aaaaggcatggggactcttatatcatcaatgggaaaaagtggtggactagtggagccatg
gacccgaggtgcaaacttctaattgtgatgggtaaaaccgacttaactgctctgaagcat
aaacaacaatccatgatcttggtagacatcaatactccaggtattacgataaagagaccg
ctgacggtatttggctttgatgatgcacctcatgggcatgcggaaatattttttgagaat
gtacgcgtcccggcaaacagtattctactcggtgaggggcgtggttttgagattgcccag
ggtaggctaggccctggaaggttgcatcattgcatgaggctaataggagcagctgagcgc
ggcatgcagatgatggttcaaagagctcttgcaagaagagtttttggaaaattaattgcc
gaacaaggctcattcctttcagatgttgccaaatgtcgaatagaactagagaaaactaga
ttactggttctggaagctgctgatcagcttgactgtctcggaaacaaagaggcccgtgct
acactcgcgatggcaaaggtcgctgcaccaaacatggcattgatggtgcttgataccgct
atgcaagtgcacggtgctgctggtttatcaggtgatactgttcttgctcatctctgggct
acggcgaggacattgagaattgcagatggtcctgatgaagtacacttggggacaatcgcg
aaaacagagttaagaagatccaagctttaa
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