Lycium barbarum (goji berry): 132640255
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Entry
132640255 CDS
T09483
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132640255
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132640255
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132640255
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132640255
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132640255
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132640255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
132640255
NCBI-ProteinID:
XP_060212754
LinkDB
All DBs
Position
5:complement(5581495..5588039)
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AA seq
984 aa
AA seq
DB search
MGKKAKKKARSAVKEARNPIASANPIEQKSQNIGTPDDAVVVVNERKGCPHIDKVIDVDR
VSAKLESSEPVRCADCREGGADRRASRTKGKNKGGADPKQKSKAIWVCLVCGHFSCGGVG
LPTTPQSHAVRHARHYHHPLVIQFENPQLRWCFQCNTLLHAKKVEDGSEQKNVFGDIAKM
IKRRPSEGPSVDVEAGTGSVTSGIKLEASASVNADGKGGYVIRGLVNLGNTCFFNSVMQN
LLAMNRLRDYFLKFDGFGGPLTAALKKLFTETSNEAASKKSVNPKSLFGSICAKAPQFRG
YQQQDSHELLRCLLDRLCSEELTLRKRIKSSEDGGKSMSSCPTFVDDIFGGRLSSTVSCI
ECGHTSVVCEPFLDLSLPVPTRKPPSKGAQSVSNAKLLPPKRSRKVRPKVSSYAAYLNAQ
SALVNGEKSQSHVHPTVPSDASLEYIDVSAMADDMGFMSQDLCSIQRSHNGQNCEGVTRQ
LTSVDDSTWLDFLDQDTLPNDDDGASQVDHVLPNQGSETGNSVQPVDSLQNNLDADTEMK
LTCTHNISPPNDLMCLDDQGQSESPDCDLASEFSKKLLIKDPGMTDVINVDSNLGTDSYT
RLSEDEAPLQLQDSEILLLPYKEVISTAGDMLKEGCEVSSAAVGLEEDSLDLDGFGDLFN
EPDSDAQPSEQPLCNAAVSQDISESDPEEVDDTDAPVSVESCLAYFTKPELLSKTEHAWQ
CENCTKILKEKRTRSKNKLTKPRSHSIMNGDEDKNPNGVSSSGTSNGSTDKDALETFEDR
LLSQKETSPQAERDSVSWLSENGTQEHHGEANSQVYSDYQSNKVQLLDAPLVSAKSESEE
SENEETDLKRVRVERDATKRILIDKVPPILTIHLKRFSQDARGRLSKLSGHVNIRDTVDL
KPYIDTRCLQKETYKYHLIGVVVHSGTMRGGHYVAYVRGGPKITGKDENTEAFAWYYASD
SHVREVSLEEVLRADAYILFYEET
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaggctaagaaaaaggccagaagtgctgtcaaggaggcgcggaatcccatt
gcatctgcaaatcctattgagcaaaagagtcagaatattggtactcctgatgatgcagtt
gttgttgtaaatgaaagaaaaggatgtccacatattgataaggttattgatgtggacaga
gtctccgctaaacttgagtcttcggaacctgttaggtgcgcagattgcagggaaggagga
gctgatagacgagctagtaggacaaaaggtaaaaataaggggggtgcagatcccaagcag
aagtctaaagccatttgggtctgtttagtatgtggccatttctcgtgcggaggtgttggg
ctccctactacacctcagagccatgcagttcggcatgcgagacattaccatcaccccctg
gttatacagtttgaaaatcctcaacttcgttggtgttttcagtgcaatactctacttcac
gctaagaaagtagaggatggcagtgaacaaaaaaatgtattcggggacatagccaagatg
attaaaaggcgtccgtctgaagggcctagtgttgatgtggaagctgggactgggagtgtc
actagcgggattaaactagaagcttctgcttccgttaatgctgatggaaaaggtggttat
gtaattaggggattggttaatttagggaacacgtgttttttcaattcagtaatgcagaac
ctacttgcaatgaatagactacgtgattacttccttaagtttgatggttttggtggtcct
cttaccgctgctctgaagaagctctttactgagacaagcaatgaagctgcctcgaaaaaa
tctgtaaatccgaaatctttgtttggttcaatctgtgcaaaggctccacagtttcgagga
taccaacagcaggacagtcacgaattgcttcgttgcttacttgatcgtctgtgtagtgag
gaattgaccctcagaaagcgaatcaaatcttctgaggatggcggtaaatctatgagttca
tgtccaacttttgttgatgacatctttggtggtcgactctctagtactgttagttgtatt
gagtgcgggcacacttcagtagtctgtgagccattcttggatctctcattgcccgttcca
actagaaaacctccatccaaaggagctcaatcagtctccaatgcaaaattattacctcca
aagagaagtagaaaagttcgacctaaagttagcagttatgcagcttatcttaatgctcaa
agtgctcttgtaaatggagaaaaatctcagagccatgtgcatcctacagttccttctgat
gcatcgctagaatacattgatgttagtgctatggctgatgatatgggtttcatgtcacag
gacttatgttccattcagaggtcccataatgggcaaaattgcgagggtgtgactaggcag
ttgacttcagtggatgattcaacatggttagattttctcgatcaggatacactgccaaat
gatgatgacggggcttcacaagttgaccacgtcctgcctaatcagggttctgaaactgga
aattctgttcaacctgttgactctctgcagaataatctggatgctgatacagagatgaag
ttaacatgtacacacaacatttctcctcctaatgatttaatgtgtttggatgatcaagga
caatccgaatcaccagactgtgatttagcttcggaattcagtaaaaagttactgattaaa
gaccctggaatgacagacgtcataaatgtggattcaaatcttggaacagattcatatacg
aggctatcggaagatgaagccccgttacaactacaagattcagagattctgttacttcct
tacaaagaagtaatctcaactgctggcgacatgttaaaagaaggttgcgaggtatcctca
gctgctgttggtttggaagaagattcattggacttggatggttttggagatttatttaat
gaacctgactctgatgcacaaccttctgaacagcctttgtgcaatgctgctgtttctcag
gacatcagcgagtctgatccggaagaggttgatgatacagatgctccagtatcggtggag
agttgtttggcttattttacaaagcctgagcttctttccaaaactgaacatgcatggcaa
tgtgaaaactgcactaaaattctaaaagaaaagagaacgagatctaaaaataaattgacg
aagcctagatcacatagtataatgaacggagacgaggacaaaaatccaaatggtgtgtct
tcttcaggaacatctaatggaagtacagacaaagatgcattagaaacttttgaggatagg
ttgttatcccaaaaggaaaccagccctcaagctgagagagattcggtctcttggctatca
gaaaatggcacacaggaacatcatggtgaagctaatagtcaagtgtatagcgactatcag
agcaataaagttcaattgctggatgctccgctggtttctgctaaatctgaatctgaagaa
agtgagaatgaggagacagaccttaaaagagttagagttgagagagatgcaactaaacgg
atcctaattgataaggtccctcctattttgacaattcatctaaagaggttcagtcaagat
gctcgggggcggttgagtaagctgagtggccatgtgaatattagagatactgttgatctc
aaaccatacattgacaccaggtgcctgcagaaggagacatacaaataccaccttattggt
gtagtggtacattcggggacgatgaggggaggtcattatgttgcatatgttagaggaggt
cccaagatcacagggaaagacgagaacacggaagcttttgcgtggtattatgcaagtgac
tctcatgttcgtgaggtctcattggaggaagttcttcgagctgacgcatacattttattc
tatgaagaaacttga
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