Lycium barbarum (goji berry): 132640277
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Entry
132640277 CDS
T09483
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00450
Selenocompound metabolism
lbb00970
Aminoacyl-tRNA biosynthesis
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
132640277
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132640277
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132640277
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132640277
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
132640277
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132640277
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132640277
Prokaryotic type
Other AARSs
132640277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
CoV_peptidase
tRNA-synt_1e
Ribosomal_S7e
Motif
Other DBs
NCBI-GeneID:
132640277
NCBI-ProteinID:
XP_060212780
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All DBs
Position
5:complement(6525356..6535832)
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AA seq
806 aa
AA seq
DB search
MSDNYKAKQKVPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRIRGYNAIY
MCGTDEYGTATETKALEDNCSPKQICDKYHAIHKEVYKWFDISFDEFGRTSTPQQTEVCQ
AIFKKLRENDCLSENTMQQLYCDTCKKFLADRLVEGNCPTPGCNYDSARGDQCEKCGKLL
NPTELLDPRCKVCRNTPCIRDTDHLFLELPLLKDKLEAYVNSMSVSGGWSQNAIHTTHAW
LKEGLKSRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYISITSCYTTEWEKWWKNPDN
VELYQFMGKDNVPFHTVIFPSTLLGTGESWTLMKTISVTEYLNYEAGKFSKSKGIGVFGN
DVKETNIPVEVWRYYLLKNRPEVSDTLFTWADLQAKLNDELAHNLGNFVNRVLSFIAKDP
ASGYGSIIPDAEGAVSHSTTKALGEKVGSCVQQYIEAMEKVKLKEGLKVAMSISTAGNGY
LQENKFWKLYKEDRPSCSIVMRTACGVVYLLACLLQPFMPSFSREVLKQLNLPPETQFSL
SDESGDIENSKRPWNILPAGHKIGTPAPLFKELTNEEVEFYREKFAGSQADRENRALNAE
TEAKKMAEQLSKAKISDGNKKKEWATKSSETKSKAPASVEGEISISRLDIRVGLITKAQK
HPDADSLYVEEIDVGEALPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPASMRGIKSQAMV
LATSNSDHTKVELVEPPKDAAIGERVTFPGFNGEPDNVLNPKKKVWETLQVDFHSNKELV
ACYKDVPFTTSVGICKVASISEGSIR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataattacaaggctaaacaaaaagtaccaatcccaggaaaaagaaacatccta
attacaagtgctttgccttatgtcaacaatgttcctcatcttggcaatatcattggatgt
gtgttgagtgcggatgtgtttgcgaggtactgtaggattagagggtacaatgcaatatat
atgtgtggtacagatgagtatgggacagctacagagactaaagccttggaggacaattgt
agtccgaagcaaatttgcgacaaatatcatgcaattcataaagaagtttataaatggttt
gatatcagctttgatgaatttggacgcacatcaacaccacaacagacagaagtttgtcaa
gcaattttcaagaagctacgggaaaatgattgcctttctgagaatacaatgcaacagctt
tactgcgacacctgcaaaaagttcttagcagatagacttgtagagggtaactgtccaacg
ccaggctgcaactatgattctgcacgaggagatcagtgcgagaagtgcgggaaactatta
aatcccacagaactactggatccaagatgcaaggtttgccgcaacaccccttgcatccga
gatacagaccatttgtttcttgagctccctttgctgaaggataagttagaagcatatgtc
aacagcatgtcagtgtccgggggatggagtcagaatgctatccatacaacacatgcgtgg
cttaaagaaggacttaaatcaaggtgtataactagagatttgaaatggggagttccagta
ccacatgaaaaatacaaggaaaaggttttctatgtatggtttgatgctcctattggatat
atatcaatcacgtcttgctacacaactgagtgggagaagtggtggaagaatccagataat
gtggagctgtatcagtttatgggcaaggacaacgtgccttttcacactgtaatattccca
tctacgcttcttggaactggtgaaagctggacgcttatgaaaactatcagcgtaacagaa
tacttgaactatgaagcaggcaaattctcaaagagcaagggtataggagtttttggtaat
gatgtaaaagaaacaaatattcctgtagaagtatggagatattacttgctgaaaaacagg
ccagaggtctcagacactttgtttacatgggcagacctacaagcaaagttgaatgatgag
ttggcacacaacttaggcaattttgtcaatagagtcctgagtttcatcgcaaaagatcca
gcctcaggttatggttcaattattcccgatgctgaaggagcagtatcacattccacgacg
aaggcgttgggtgaaaaagtcggaagttgcgtacagcaatatatagaagccatggagaag
gttaaattaaaagaaggcttgaaggttgcaatgtctatttctacagcaggaaatggttat
ctgcaggagaacaaattttggaagctttacaaggaagatagaccttcctgttcgatagtg
atgagaactgcttgtggtgtggtatatcttctggcatgtcttttacagccatttatgcca
tctttttcacgtgaggtgcttaagcagctgaacttgcctcctgaaacacaattttcactg
tctgatgaaagtggtgacattgaaaatagcaaaagaccatggaatattctacccgcaggt
cacaaaattggaacaccagcaccattgttcaaggagctgacaaatgaagaagttgaattc
tacagagagaagtttgcaggaagtcaggcagatagggaaaatagggctctgaacgcagaa
actgaggccaaaaagatggctgaacaattgagcaaagcaaaaatatcagatggtaataag
aagaaggaatgggctacaaaatcttctgaaacgaaatctaaggccccagcctctgttgaa
ggagaaatttccatcagcagactcgacattcgtgttggcctcataacaaaagcacagaaa
catcctgatgctgattcattgtacgtggaagagattgatgttggtgaagctctgcccaga
actgttgttagtggccttgtaaaatatattccacttgaggaaatgcagaatcggaaggtc
tgtgttttatgcaacctaaaaccagctagcatgagggggataaagtcccaggcaatggtt
cttgccacttctaatagcgatcacactaaggttgaattagtcgagccacctaaagatgct
gcaataggggaacgagttacattcccggggtttaatggcgagcctgacaatgtcttgaac
cctaagaagaaggtttgggaaactcttcaggtagattttcatagcaataaggagttggta
gcatgctataaagatgtgccattcaccacatcagttggtatttgcaaggttgcatcaatt
tctgaaggatcaataaggtag
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