KEGG   Lycium barbarum (goji berry): 132640297
Entry
132640297         CDS       T09483                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03020  RNA polymerase
lbb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132640297
  09124 Replication and repair
   03420 Nucleotide excision repair
    132640297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbb03021]
    132640297
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132640297
Transcription machinery [BR:lbb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     132640297
  RNA polymerase III system
   RNA polymerase III
     132640297
  RNA polymerase I system
   RNA polymerase I
     132640297
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132640297
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C OB_RNR_1st NA-iREase1
Other DBs
NCBI-GeneID: 132640297
NCBI-ProteinID: XP_060212801
LinkDB
Position
5:7175724..7187499
AA seq 151 aa
MEMLADRGYLVGEFEINMSKHQFLQKYGENMKREDLVIQKAKRNNSSEQIYVFFPEEAKV
GVKTIRPYAERMKTDVLQAILVVQQNLTPRARDLINEVSTKFHLEFFQLPRILITDPVAR
YYGLKRGQVVKIIRPSETAGRYVILTICGLG
NT seq 456 nt   +upstreamnt  +downstreamnt
atggaaatgttggccgataggggctaccttgttggagagtttgagataaacatgtcaaaa
catcagttccttcagaagtacggcgagaacatgaagagagaagaccttgtaattcagaaa
gccaagcgcaacaacagttctgaacagatatatgtgttctttccggaggaggcaaaggtc
ggtgttaagacaataagaccttatgcagagcgcatgaaaacagatgtcttacaagcaatt
ctagttgtacaacaaaatttgactcccagagctcgcgatttaataaatgaagtatctaca
aagttccacttagagtttttccagcttcctcgaattttgatcactgatccagttgctaga
tattatggtctaaaacgtggccaagtcgtgaaaattatcagaccaagtgagactgcaggc
cgttatgtgattttaacgatatgtggtttgggctag

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