Lycium barbarum (goji berry): 132640300
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Entry
132640300 CDS
T09483
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132640300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132640300
03110 Chaperones and folding catalysts [BR:
lbb03110
]
132640300
03029 Mitochondrial biogenesis [BR:
lbb03029
]
132640300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132640300
Enzymes [BR:
lbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132640300
Messenger RNA biogenesis [BR:
lbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132640300
Chaperones and folding catalysts [BR:
lbb03110
]
Heat shock proteins
HSP60 / Chaperonin
132640300
Mitochondrial biogenesis [BR:
lbb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132640300
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132640300
Exosomal proteins of other body fluids (saliva and urine)
132640300
Exosomal proteins of breast cancer cells
132640300
Exosomal proteins of colorectal cancer cells
132640300
Exosomal proteins of bladder cancer cells
132640300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
132640300
NCBI-ProteinID:
XP_060212807
LinkDB
All DBs
Position
5:complement(7215130..7220903)
Genome browser
AA seq
573 aa
AA seq
DB search
MYRFAAKLASKSRVARSSTQQVGSRLNWSRNYAAKDIKFGVEARGLMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKNIEFKDRIKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLYNELEVVEGMKLDRGYISPYFITNEK
NQKCELDDPLILIHEKKISSINAIVKVLELALKKQRPLLIVSEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAALTGGQVITEELGLNIENVELDMLGKCKKVTISKDD
TVVLDGAGEKKAIEERCEQIRSTIELSTSDYDKEKLQERLAKLSGGVAVLKVGGASELEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELETLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGSVVVGKLLEQDNLDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLLTTTEAVIVELPKDEKASPAMPGGGMDY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaaactggcttctaaatccagggttgcaagaagcagcacccaa
caggttggtagtaggttgaattggagcagaaactatgcagctaaggatattaaatttgga
gttgaagctcggggtttgatgcttcaaggagttgaacagcttgctgacgcagttaaagtc
accatgggtccaaagggtcgtaatgtggtgattgaacaaagttggggtgcacccaaggtg
acaaaagatggtgtcactgttgcaaaaaacatcgaattcaaggacagaattaaaaatgtt
ggtgcaagccttgtaaaacaggttgccaatgccactaatgatgttgctggtgatggtacc
acttgtgcaacagtcctcacccgagcaatatttgctgaagggtgcaagtctgtagctgct
ggtatgaatgcaatggatcttagacggggtatcacaatggctgttgatgctgttgtaaca
aacctgaaaagcagagcacggatgataagcacatccgaggagattgcccaggttgggaca
atctctgcaaatggagaaagggaaattggtgagctaattgcaaaggcgatggagaaagtt
ggcaaggaaggtgtcatcactattcaagatggaaagacattgtacaatgagttggaagtt
gttgaagggatgaagctggacagaggctacatatccccatactttatcacgaatgagaag
aatcaaaaatgtgagctggatgacccacttattcttattcacgagaaaaaaatctcaagc
ataaatgctattgtgaaagtgctagagttggctttaaagaaacaaaggccactcttaatt
gtgtccgaagatgtggagagtgaagcacttgctacacttattctgaacaagcttcgtgct
ggaatcaaggtttgcgccatcaaagctccaggatttggtgaaaacaggaaggctaatttg
caagatcttgctgctttaactggaggccaggtcatcacggaagaacttggattgaacatt
gaaaatgtggagttggacatgctgggaaaatgtaaaaaggtcactatctccaaggatgac
actgtcgttcttgatggtgcgggtgagaagaaggccatagaggagagatgtgaacagatt
agatcaacaattgaattgagcacatctgattacgacaaggagaaattgcaggaaagacta
gctaagctttcagggggtgttgccgtgttgaaggtaggaggagctagtgaacttgaggtt
ggtgagaagaaagacagagtcactgatgctttgaatgccacaaaagctgctgtagaggaa
ggaattgttccaggcggtggggttgcacttctttatgcgtcaaaagaattggagacgttg
ccaacagccaactttgaccagaagatcggtgtgcaaattattcagaatgctctcaagaca
ccagtacatacaattgcctctaatgctggggtagagggatcagtagtggttggcaaactg
ttggagcaggataacctggatcttggatatgatgctgcaaaaggtgaatatgttgatatg
gtaaaatcagggatcattgacccattgaaagtaattaggacggccttggttgatgctgct
agtgtgtcatctctattgactacaactgaagctgttattgttgagcttcccaaggatgag
aaggcatctccagctatgcctggtggtgggatggactactaa
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