Lycium barbarum (goji berry): 132640530
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Entry
132640530 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132640530 isoform X1
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132640530
Enzymes [BR:
lbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
132640530
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
132640530
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
Motif
Other DBs
NCBI-GeneID:
132640530
NCBI-ProteinID:
XP_060213122
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All DBs
Position
5:complement(14420179..14435994)
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AA seq
808 aa
AA seq
DB search
MGGRGRSRTQRKHFAQSRENNWKYSKNSSDQQQENDNNNRENSNPTWKPFTTQNFAFEEY
YKEQGIVPPEEWNTFMECLRSELPAAFRINASSQCYLEIQAKLENDFMKSLQEEGTDGSE
VVAIRPLPWYPENLAWQSTFSRKQLRKNEILKRFHEFLKLQNEIGNITRQEAVSMVPPLF
LDVRPDDFILDMCAAPGSKTFQLLEMIHHSAEPGSLPGGMVLANDVDVQRCNLLIHQTKR
MSTANLIVTNHEAQHFPSCHLNRINAKGSEPREAKELDIDQLLFDRVLCDVPCSGDGTLR
KAPDIWRRWNAGMGNGLHGLQVQIAMRGMSLLKVGGRMVYSTCSMNPIENEAVVAEILRR
CGGSVELVDVSSELPQLVRRPGLKKWKVQDKGMWLTSFNEVLDSRRAAVVPGMFPSGKGY
VDALEHNGNSQNGTGMVQDPATPTTILGEEASSLPLERCMRIVPHDQNSGAFFIAVLHKL
SPLPLIQMKTTSRGNFQAQNFIEVKDINAGEVEKVDSVGNQLSEATIDDADILENGKDEA
PLDTDPSKIVEEKRPELIEPSSDGRAGPELVKGRRKLQMQGYWRGIDPILFYREEAAVDQ
IKAFYGIKESFPFRGHLIVRNSDISHVKRVYYVSKSVKEVLELNFLAGEQLKIAAVGLKM
FERQKDVSAQCVFRITSEGLPLLLPHMSKQIVYASPTDFKHLLQYKSIKFGDFVDAEFRE
KASKLQFGCCAAILNKDNKTLSELRVDASTIAIGCWRGRNSITVMVIALDIQELLERMLM
YLEEDSDSLLLENKPLIAAEADEIVKAD
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcagaggaaggtcaagaactcagagaaaacactttgctcaaagcagagaaaac
aactggaaatatagcaaaaatagttctgaccagcaacaagaaaatgataataataataga
gaaaacagtaaccccacttggaaaccatttaccacccaaaattttgcctttgaagaatat
tacaaggagcaaggaattgtgccaccagaagaatggaacacttttatggaatgccttcga
agtgaattgcctgctgctttcaggatcaatgcaagtagccaatgctacttggaaattcaa
gccaagttggagaatgattttatgaaatctctgcaggaagaggggacagatgggagtgag
gttgtcgcaataagaccattaccttggtatcccgagaatctagcctggcagtcaactttt
tctcgaaagcagttgaggaaaaacgaaatacttaagaggttccacgagttcttgaagcta
caaaatgagattggtaacattacaagacaggaagctgttagcatggttcctcctctgttc
ctggatgtacggccagatgatttcattcttgacatgtgtgcagctcctggttcgaaaacg
tttcagttacttgagatgatacaccactcagctgaacctggatcattacctggtggaatg
gtcttggcaaatgatgttgatgttcagaggtgtaaccttctcatccatcaaacgaagaga
atgtccactgccaacttgatagtcacgaatcatgaagcacaacacttcccgagctgtcat
ttgaatagaattaatgcaaaaggttctgagccaagagaagcgaaggaacttgatattgat
caacttctatttgatcgtgtcctgtgtgatgttccatgcagtggtgatggcactttacgc
aaagcccctgatatatggagaagatggaatgcaggaatgggtaatggtctacatgggcta
caggttcagatagcaatgcgaggcatgtctttgcttaaagttggtggaaggatggtttat
tcaacttgctcaatgaatcccattgagaatgaggctgtggttgccgagattttgagaagg
tgtggggggtctgttgaactcgttgatgtctccagcgaacttcctcagcttgttagaagg
ccaggtctgaaaaaatggaaggttcaagataaagggatgtggttgacttctttcaatgaa
gttcttgattctcgcagagctgcagttgttcctggaatgttcccctctggcaaaggatat
gtggatgcacttgagcataatggtaattctcaaaatggtactgggatggtgcaggatcct
gcaactcctactacaatcttgggcgaggaggcttcaagtctaccattggaacgttgtatg
aggatagtgccacatgatcagaacagtggagctttctttattgctgtccttcacaagctt
tctcctttaccactcatacaaatgaagacaacttccagaggcaatttccaagcacaaaat
tttatcgaggtcaaagatataaatgctggtgaagttgagaaagtggattctgtaggtaac
cagctatctgaagcgactatagatgatgctgatattcttgaaaatggaaaggatgaagct
ccactggatactgaccccagcaaaatagttgaagaaaaaaggccggagctgattgaacct
tccagtgatggaagagctggtcctgagttggttaaagggagaagaaagttacaaatgcaa
ggatattggagagggattgacccaatattattttaccgggaggaggcagctgtggatcag
ataaaggccttctatggcatcaaggaatcctttccattcagaggccatttgattgtgagg
aatagtgatatcagccatgtgaagagagtttattatgtatctaaatctgtgaaagaagtt
cttgaactcaattttctagctggtgagcagctcaagatagctgccgttgggctcaagatg
tttgagcggcaaaaagatgtttctgcacaatgtgtattccgcataacatctgaaggattg
ccactgctgcttccacatatgagcaaacaaatagtgtatgcatctcctacagatttcaag
catcttttgcagtacaagagcattaaatttggtgattttgtggatgctgaattccgggaa
aaggcttcaaagctgcagtttggttgttgtgcagcgattttgaataaagacaataagacc
ttgtcagaacttcgagtggatgcttcaactatcgctataggatgctggagaggcaggaat
agcatcacggtgatggtgattgcacttgatatccaagaacttctagaaaggatgttgatg
tatttggaggaggattcagattccttattgctggaaaacaagccattgattgctgccgag
gcagatgaaatagttaaagcagattaa
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