Lycium barbarum (goji berry): 132640553
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Entry
132640553 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132640553
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132640553
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132640553
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
DUF1378
Motif
Other DBs
NCBI-GeneID:
132640553
NCBI-ProteinID:
XP_060213152
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Position
5:complement(15538995..15554830)
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AA seq
682 aa
AA seq
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MNKTGWKRQPRLVLWFCSIVFQLFLLVSGSRSTTDQFRHTPLDDSQKLISTTPPVKLHIS
RNYVVMNNGIVQITLTNPTGSIAAVRYNGIDNVLETDFKDTNRGYWDTVWERPGDKDYTF
DMFLATKFRVIAQDKNKVEVSFTRTWNPSINGTANDLPLNIDKRYVMLRGSSGFYSYGIF
EHLKGWPSLILEEARIAIKLRRALFHYMAISDDMQTMMPTDEDRSDGQILDYKEAVRLTH
PSNPKLKGEVDDKYQYSFENKDIKVHGWICNTPHVGFWVITPSYEDRNGGPLKQDLTSHA
GPTSLAIFFSGHYAGPELGVTLKKGEQWKKVFGPVFFYLNSDSGDNHRTLWEDAKKQMQE
ETAKWPYDFPESVDYPHANERGTVGGQLFIRDRYINKDPVYAKSAYIGLALPGDVGSWQY
ETKGYQFWTQTNETGQFKISGVRPGTYSLYSWVPGIIGDYKYNYDINVKQGSDINLGHLI
YDPPRNGPTLWEIGIPDRTAAEFFVPDPLPGLTNQLFNDTTQKYRQYGLWDRYTDLYPKT
DLVYKVGVSDYRKDWFFAHVTRRTRSKNYIPTTWKISFELPRVDPKGNYTLRVALASATY
SHLQGRINNPSSQTPHFETPSIGRSNAIARHGIHGLYWLFNFQIPGSQLQKGENKIYLKQ
IKAGYPFYGHQYDYIRLEGPPQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaataagacagggtggaagaggcaaccgcgtcttgttttatggttttgttccattgtt
ttccagcttttcttgcttgttagtggttcaaggtcgacgacggatcaatttaggcatact
ccactagacgatagtcaaaagttgatatcaactactcctcctgtcaaactgcatatctca
cgtaattatgtagtgatgaataatggcattgtccaaattaccctaactaatcccactgga
tccattgctgcggtgcgttacaatggtattgataatgtactagagacggacttcaaagat
acaaatagaggatattgggataccgtgtgggaacgtcctggagacaaggattacactttt
gatatgtttttagcaacaaaattcagagtaattgcacaagacaaaaacaaagtcgaagtt
tcttttacaagaacatggaatccttccattaatggtactgccaatgatcttcctctaaac
attgacaaaaggtatgtgatgttgcgtgggagttctggattttattcatatgggatattt
gaacacttgaagggctggcccagtctaattcttgaagaagccaggattgccatcaagcta
agaagggctctgttccactatatggccatatcagatgatatgcaaacgatgatgccaaca
gatgaagatcgatctgatgggcagatccttgactacaaagaagcagttagactaacacat
ccatccaatcctaaacttaagggcgaggtggatgacaagtaccaatattcgttcgagaat
aaggatattaaagtacatggatggatttgcaatactccacacgtaggtttttgggtgatt
acacctagttatgaagaccgtaatggtggaccgttgaagcaagatctaacttctcatgct
ggtcccacctccttagcaatattttttagtgggcattacgcagggccagagttaggagtc
acactaaaaaaaggagagcaatggaagaaggtctttgggcctgtcttcttttaccttaac
tctgattctggtgacaatcaccgtacactttgggaagatgccaaaaaacagatgcaggaa
gaaactgcaaaatggccatatgatttcccagaatctgttgattatccccatgctaatgaa
cgcggtacagttggaggtcaattattcattcgagacaggtacataaacaaagatcctgta
tatgcaaaatctgcatatattggattagctcttcctggagatgttggatcttggcaatat
gagaccaagggttatcaattttggacccaaacaaatgagactggacaattcaaaatcagt
ggcgttagacctggaacttatagcttgtattcttgggtccccggaattattggagattac
aaatacaactatgacataaatgtcaaacaaggaagtgatattaacttaggtcacctaatt
tatgatcctccaagaaatggtccaactttatgggaaataggcattcctgatcgaactgct
gcagaattttttgtccctgatccattgcctgggctcacaaatcagttattcaacgatact
acacaaaaatatagacaatatggtttgtgggatcgatacactgacttatatccaaaaaca
gatttggtatataaagttggtgtcagtgattatcgaaaagactggttctttgctcatgta
accaggagaactagaagcaagaattatataccaacaacatggaaaatttcatttgaactc
ccaagagttgatccaaagggaaattatacactacgtgtggcactggcctctgcaacatat
tcccatttgcaggggaggatcaacaacccctctagccaaacgcctcactttgaaactcca
tcaattgggaggagtaatgcaatagctagacatgggatacatggattatattggctcttc
aattttcaaattccagggtcacaactacaaaagggagaaaataaaatatatttgaagcaa
ataaaagctggttatcctttctatgggcatcaatatgactacattcgtttggaaggccct
ccacaataa
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