Lycium barbarum (goji berry): 132640613
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Entry
132640613 CDS
T09483
Name
(RefSeq) cycloartenol synthase 2-like isoform X1
KO
K01853
cycloartenol synthase [EC:
5.4.99.8
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00100
Steroid biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
132640613
Enzymes [BR:
lbb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.8 cycloartenol synthase
132640613
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
132640613
NCBI-ProteinID:
XP_060213262
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Position
5:complement(18045735..18055913)
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AA seq
763 aa
AA seq
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MWKLKLSEGDDPCVRSLNNHVGRQYWEFDQNGGTLEERSQVENIRQHFHKNRFHVKHSSD
LILRLQFAKEKSIDMKLANLVKIDGEEEISEEAKVMTTLRKALRFYSTIQAEDGHWPADY
GGPLFLLPGLVISLFIMGVVNAVLSEAHQKEILRYLYNHQNRDGGWGLHIEGHSTMFCTA
LNYVTLRLLGEDVNNEGMEKARKWIIEHGGVTYIPSWGKFWLSVLGVYEWSGNNPLPPEL
WLLPYFVPIHPGRMWCHCRMVYLAMSYLYGMRYVGPVSSIILSLRKELYSIPYLDIDWDL
ARNQCAKEDLYYPHPLFQDILWEGLHKIAEPLLMQCPLSKLRKKALDTVMKHIHYEDEST
NYICIGPVNKVLNMLCCWVEAPYSEAIKLHFSRIKDYLWLAEDGMKMKGYNGSQLWDVSF
GVQAILATNLPEEYGVMLKNAYHFIKASQVREGSSGDPKKWYRQRSRGGWPFSTVDNGWI
VSDCTAEALKAALILSQMPIDVVGEAIAPHKLCDAVDLLLSLQNSNGGFASYELTRSYAW
LEMINPSETFGDITIDYQYVECTSAVIQALQSFKKHYPKYREKEIGACISKALCFIQSIQ
LPDGSWYGSWGVCYTYGTWFGISGLVAGGKTHKNCKSIRKACHFLLSKQLQPSGGWGESY
LSSQHKVYTNIEGNKPHNVNTAWAMLALIEAGQGKRDPTPLKRAAKVLINSQMENGDFPQ
QEIIGVFNRNCMISYSAYRNIFPIWALGAYLNQVLLPSKEHHE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcttaaattgtcagaaggagacgatccatgtgttagaagtttgaacaatcac
gttggtagacaatattgggaattcgatcagaacggtggaacacttgaagagcgatctcag
gttgaaaatattcgtcaacattttcataagaatcggtttcatgttaaacacagttctgat
ctcatattgagacttcagtttgcaaaggagaagagtattgatatgaagttggcaaattta
gtgaaaatagacggtgaagaagaaataagtgaagaggcaaaagtgatgacaacattgaga
aaggctttaagattctactcaactattcaggctgaggatgggcattggcctgctgattat
ggtggtccattgtttcttttgcctggcttggttataagtttattcataatgggagtggtg
aatgcagtgttatcagaagcgcatcaaaaggaaatacttcgttatttatataatcatcag
aatagagatggagggtgggggttgcatatagaaggacatagcaccatgttttgcactgct
ctcaactacgtgacattaagactacttggagaagacgtaaataatgaaggcatggagaaa
gctagaaaatggattattgagcacggtggtgtcacttatattccttcctggggaaagttc
tggctctctgtactaggcgtatacgaatggagtggcaataatccactaccgccagaatta
tggcttctcccctactttgttcctatacacccaggtcgaatgtggtgtcattgtcgaatg
gtgtatttagcaatgtcttacttgtatgggatgagatatgtaggtcctgttagttccatc
atattatcacttagaaaggagctctattcaattccctacctcgacattgattgggacttg
gccagaaaccaatgcgctaaggaagatttgtactaccctcatcctttatttcaagacatt
ctatgggaaggtcttcacaaaattgcagaacctcttctcatgcaatgcccactctctaag
ttaagaaaaaaggcactcgatactgtgatgaaacatattcattatgaggatgaaagtacc
aactatatttgtattggacctgtcaataaggtattgaacatgctgtgttgttgggtagag
gctccatattccgaggcaatcaaacttcatttttccagaatcaaagactatctatggctc
gctgaagatggcatgaagatgaagggatacaatggaagccaattgtgggatgttagtttt
ggtgtacaagcgatcctagctacaaaccttcctgaagaatatggtgtgatgcttaaaaat
gcataccacttcattaaagcctcacaggtcagagaaggtagtagtggagatcccaagaag
tggtatcggcagcgttctagaggtggatggccattctccactgtagacaatggttggatt
gtatcagattgcactgcagaagccttaaaggcagcactcatcctatctcagatgccaata
gacgttgttggagaagcaatagcacctcataagctatgtgatgccgttgatttgctactc
tctcttcagaatagcaatggtggatttgcttcgtatgagctaacaagatcttatgcatgg
cttgagatgattaatccatcggaaacatttggggatatcactattgattaccagtatgta
gaatgtacttcggcagtaattcaagctcttcaatccttcaagaaacattaccccaaatat
cgagagaaagaaataggagcatgtattagcaaagctctctgtttcattcaaagtattcaa
cttcctgatggttcatggtatggctcgtggggagtttgctatacctatggaacatggttt
ggaataagtgggctggttgctggtggcaagactcataaaaactgcaaaagcatcagaaaa
gcttgtcatttcctattatccaaacaacttcaaccttctggtggttggggagaaagctat
ctatcatctcaacacaaggtttatacgaacattgaagggaataaaccgcacaatgtcaac
accgcatgggccatgttggctcttattgaagctggccagggcaaaagagatcctactcca
ctcaaacgagctgctaaagtgctcataaattctcaaatggaaaatggagattttccacaa
caggaaataataggagtattcaacaggaactgtatgataagctactcagcctacagaaac
attttccccatatgggcacttggagcttatctcaatcaagtattattaccttcaaaagag
catcatgaatag
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