Lycium barbarum (goji berry): 132641178
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Entry
132641178 CDS
T09483
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132641178
03015 mRNA surveillance pathway
132641178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132641178
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132641178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
132641178
NCBI-ProteinID:
XP_060214057
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All DBs
Position
5:complement(114009775..114030437)
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AA seq
642 aa
AA seq
DB search
MGAVKLQLPLPKSVDGVTLDPNPDWSFDALLVELNSIEKKLNASSKFPIPFTKTEFRQLS
ASKDNSRRGFVMQVSDDGVEDMDGDTEHEVGDHFLTGGKRFACDEIYLSDSDQSEEGLHI
DLQRDLMDKVGLVESGLSELANEHQRTIAEEMRDQLSALEAELMDESEKLASTLERVERN
TEAQREMNRKFDMQYQRKIAEALDDLLTAVQRDHEHKSQIEERKIRDDAAREEAKRKEKA
LQEEKARQERIRAEAKVQARLEAERVEKEKAAAQEAERKAAKESAAAVEKKTSESLATAP
SEGSKISRDSSQPVRPMSDGQRHSAGNTIRVTENAQKLEEKRLSIYNEIAAQNEALGLSS
NKAYRKYEMEISRRIRTITGSKENVRVKADELLKLISGSTCPQSISIAMFAQQVVSLCVN
LTGSFNSKVYAYGRVFVHVTSKVPRAMDILIAELNKVCIYTVPKYIIYSEAAFQTKEAYD
KAIGYAEEDGKIENTDSYVNRLSAYMKLYGALVQTEVEGCQNLHGLREGWAWIARFLNVI
PANLYTAAALQAFLEMAGFALHKRYKTQFRKLLDIITKDFLTALKDRGDAKLMMVTEKLR
SYIESNQFLNEPEGWRLRSSLESHVFTPESDQQYHHQQNRFH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgttaaactgcaacttccattgccgaaaagtgttgatggagtgaccctggat
ccaaatcctgattggagctttgatgctttattggtcgagctcaactcgatagagaagaag
ctcaatgcatcatcaaaatttccaataccttttaccaaaacagaatttcgacaactctcg
gcttcaaaggataattctcggagaggctttgttatgcaagtgtctgatgatggtgtggag
gatatggacggagatactgagcatgaagttggtgatcattttcttacgggaggaaaacgt
tttgcctgtgatgaaatctatctgagtgatagcgaccaatctgaagagggcctgcacatt
gatcttcaacgtgatctaatggataaagtgggattggtggaaagtggtttatctgagtta
gctaatgagcatcagcgtactattgcggaggaaatgagagatcaattatcagcacttgaa
gctgagttgatggatgaaagtgagaagcttgcctccacactagaacgagttgagagaaat
actgaagctcaaagggaaatgaaccgaaaatttgacatgcagtaccagcgtaaaatcgca
gaagcacttgatgatcttctaactgccgtacaaagggatcacgaacacaaatcccaaatt
gaagagaggaagataagagatgatgcagctcgtgaagaggccaaaaggaaagaaaaagct
cttcaagaagaaaaagcccggcaagaaaggatcagagcagaagccaaggtgcaggctagg
ctggaagctgaaagagttgaaaaggaaaaagccgcagcacaggaagctgagaggaaagca
gccaaagaatctgcagctgcggtggagaagaagacatctgagtcattggcgactgctcct
tcggagggtagcaagatttcaagggattctagtcagcctgtgagacccatgtctgatggg
cagagacattcagcaggaaatacaatcagggtgacagaaaatgctcaaaagctagaggag
aaaagattaagcatttacaatgaaatagctgcacagaatgaagcactggggttgagttca
aacaaggcttaccgaaaatatgaaatggaaatatccagacgaatcagaactatcactggt
tcaaaagaaaatgtcagagtgaaagcagatgaattacttaagttaattagtggatcaaca
tgtccacaatccatcagcattgcaatgttcgcgcagcaggtggtgtccctgtgtgtgaac
cttacaggaagctttaacagtaaagtctatgcttatggccgtgtatttgtccatgttaca
tcaaaggtccctcgtgccatggatattctcatagctgagttgaacaaagtttgcatttac
acagttcctaagtacattatttactcagaggcagcattccagactaaagaggcttatgac
aaagctattggctatgcagaggaagatgggaagatagaaaatactgatagttatgtgaat
cgcttaagtgcatacatgaaattatatggtgctcttgttcagactgaagttgagggctgc
caaaacttgcatggcctcagagaaggttgggcatggatagccagattcttaaatgttatc
cctgcaaatttatatactgcagctgcattgcaggcttttcttgaaatggcaggttttgct
ctacacaagagatataagacacaattcagaaagctgttggatatcattactaaagatttt
ctaactgcattgaaagatcgaggggatgcaaagttgatgatggtgactgagaagctccgg
agttatatagagtcaaatcagttcctgaatgaacccgaaggctggcgcctcaggagttct
ttggaatcacacgttttcactccagagtcagatcagcagtatcatcaccagcagaataga
ttccattag
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