Lycium barbarum (goji berry): 132641200
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Entry
132641200 CDS
T09483
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132641200
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132641200
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132641200
NCBI-ProteinID:
XP_060214076
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Position
5:complement(115864341..115867076)
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AA seq
400 aa
AA seq
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MAMPLSFLLSLFLAPIFTFSSHVPDPEVIVQEVNQKINASRRNLGYLSCGTGNPIDDCWR
CDPNWEKNRQRLADCAIGFGKQAIGGRDGKIYIVTDTSDDPVNPKPGTLRYGAIQDEPLW
IIFSRDMVIKLKEELMLNSFKTIDGRGGSVHIAGGPCITIQYVTNIIIHGLNIHDCKQGG
NAYVRDSPEHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIRGSTAITISNNY
MTHHNKVMLLGHSDSFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
AIGGSASPTINSQGNRFLAPNDVSNKEVTKHEDAAENEWKNWNWRSDGDLMLNGAFFTRS
GAGASSSYAKASSLSARPSTLVNSITMNAGALGCKKGKRC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgccactttcctttcttctttctctttttttagctcctatcttcacattctcc
tcccatgttcctgaccctgaagttatagtccaagaagttaatcagaaaatcaatgcatca
agaaggaacttaggctatttatcatgtggcacaggcaaccccattgatgattgctggaga
tgtgaccccaattgggaaaaaaacaggcaaagattagctgattgtgctattggctttggc
aaacaagccattggtggaagagatggcaaaatatacatagttactgacactagtgatgac
cctgtgaacccaaagccaggcactttaagatatggtgcaattcaagatgaacctctttgg
ataatattttctagagacatggtcattaagttaaaagaagaattaatgttgaattcattc
aagactattgatggtagaggtggtagtgtacacattgctggtggtccatgtattactata
caatatgttacaaatattattatacatggtttgaatattcatgattgtaagcaaggtggg
aatgcttatgttagagactcaccagagcattatggttggaggacattatcagatggagat
ggggtttctatttttggaggaagtcatgtttgggttgatcattgttctttgtcaaattgt
agagatgggttaatagatgcaatcaggggatctacagccattactatttccaataattat
atgacacaccataataaggtgatgcttttgggacatagtgattcatttactagggacaag
aacatgcaagttaccatagcttttaaccattttggagaagggcttgtgcagaggatgcca
agatgtagacatggatatttccatgtggtgaataatgactacacacattgggagatgtat
gcaattggaggaagtgcttctccaactatcaacagccaaggcaatagatttcttgctcct
aatgatgtctccaacaaggaggtgacaaaacatgaggatgcagcagaaaatgaatggaaa
aactggaattggagatctgatggtgatttaatgcttaatggagctttttttacaagatct
ggtgctggagcttcttctagttatgcaaaagcttcaagtttaagtgcaaggccatctact
ttagttaattctattacaatgaatgctggtgcacttggctgcaaaaagggcaaaagatgc
taa
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