Lycium barbarum (goji berry): 132641209
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Entry
132641209 CDS
T09483
Name
(RefSeq) trans-Golgi network-localized SYP41-interacting protein 1
Organism
lbb
Lycium barbarum (goji berry)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT20
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
132641209
NCBI-ProteinID:
XP_060214089
LinkDB
All DBs
Position
5:complement(116342256..116351796)
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AA seq
1823 aa
AA seq
DB search
MSEKLKADENDELNAASFTVEPAALNQADATNLNGTKDMKMAEDAGREDMFVDCPDVIES
PETPRYVEESNDAQDSELERLSNGAHDLDLKAEVEQLRKMLNESVAEKDRIAREAENQAE
SRIRELNDMIHMKNQEIDALNSKVSEFSMARDAALSHLNSEQENSARLSEIQLEKEHHMT
EIANEILASLSSAGPQEELSDESVTGKMFHVKNRISFLVEKYNVFFSEVDQLKWRLTEVA
PDHNMQDEMGVLVAASDALAEFRTREVNLNQHLSFLSDENGKLSEELNKHKFMVENASAE
ITKLNAEIEQERTRYANTKEKLSLAVTKGKALVQQRDALKRSLSEKTSELERYRIELQEK
SNSLEAAEETKDLLGRSENLAASLQEALIQKEMILQKCEEILSKATGSEQFQSRDTIQKA
EWLADEMNALNETSLQLQRVTDSLSSFDFPQSVQSNGPDAQVAWLLESFYLAKGEVTKLH
EQMVAAKEAANNEIGQLTASLVVEAQDKSYLQEELEDLNHKYAVLAQKEHEASMDKDRII
SMLLEASKINTHDQELVYQSQSDMTVLINRCVENIKEESSASLESYKHQFESFEQIQSNL
YIRDLELRLYGQILTEEVSDKAELNRLSNHSVKVTEELSALKEEKESLEKNLEQYEDKVS
LLREKLSMAVKKGKGLVQEREKLKGALDEKNAEIEKLQSDLHLQESLSNDNRLQIDKLLA
EMDRIPQLEADLVAMKDQRDQLEQFLVERNNMLQKVIESLDGIVLPADLSFQDPIKKVKW
LSRYLSESQTAKIEAEQELERVKDEASSLANKLLEVQESIKSLEDALSAAQNNISQLLED
KNELEAAKALVEKELEKAVEEASAKSVEFANVFADRKSVEDALSLAEKNVLVLKNEKEEA
LLGKDAAESELQKIKEEFSFHANKLKMADETKQSLEDALVQAEKNISLLTEENNRVQVGR
ADLENEINKLKGEADFQNSKLSAASMTIKSLEDALLSSENKISDLVNEKKNAEEEIVVLT
SKLDACRQELAGSQGSTETKQSLEDALVQAEKNISLLTEENNRVQVGRADLENEINKLKG
EADSQNSKLSDASMTIKSLEDALLNSENQISSLVNQKKNAEEEIVVLTSKLDACMQELAG
SQGSVETKVLELSTHLSRLQFHLRDDAVFSSLRKSFEEKFESLKDMDLILKEIRDSFSKI
ETEVLPDSPTKDDSSFSIPSVYVVNDALNEEFANGEPNATDGDNVTLLLGKIVDGFQLRN
KILAENIGSYSALMDDLIKDILKKLELTKSQALPLIELTESLKQKVKDAEVGSLAQENTI
QLLETDLKVLLSAFNDATDELALTQNRLSELGSNFDLVKLKEPSHAQLGKFGEDADRLAL
ESTESARTAEKLLLAARQSHHLSEQFKPVMDVMVGTIKDLQVKLEESNSTCVKVLEEKEF
HQEKISHLETNLEALNDLCSEMRLKLEDYQTKEDNIKEKEAELLSLNAQASRNFQEAEDL
TLSAFLMKSLFDKLNGIETLMEHDVGDAEVYDSPDVRKLFYVVDTFPKLQLQLSSLSLEK
KELQSSLEKQALRIEHLKEEVEEYTTDAEDYEKMKNELLEFTIGLENIIQKLGSNNLVGL
RKETLVTGLLPVLEKLIVAKVSESENLKAKTEELLADLHGTQKVVEDLSSKVKSLENSNQ
AKVTPLEINQERGILEAASLPSQSEISEVQDVVPVSKNLASSSVTSAAHVRTLRKGSTDQ
LAINIDSESERLIDDKEADQEKGHAFKSLNTSGLIPGQGKMIADRIDGVWVSSSRALMSH
PRGRLGLIAYCLLLHIWLLGTIL
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaattgaaagctgatgaaaatgatgagcttaatgctgcttcttttactgta
gaaccagctgctcttaatcaggcggatgctacgaatctaaatggtacaaaagatatgaaa
atggcagaagatgcgggaagggaggacatgtttgttgattgccctgatgtcatagaaagt
cctgaaactccgcggtatgtagaggagagcaatgatgcacaggatagtgaactggaaaga
ttgagcaatggagcgcatgatctcgacttgaaagctgaggtagaacaattgcgcaaaatg
ctaaatgaaagtgttgctgaaaaagatcggattgctcgagaagctgagaatcaggctgag
agcagaatcagagaacttaatgatatgatacatatgaagaatcaagaaattgatgccctc
aattcaaaggtttccgagttttcaatggcacgagatgctgctctttctcatttaaattca
gaacaagaaaattctgctcgcttgtctgagattcaacttgagaaggagcatcatatgaca
gagattgctaatgagatcttagcttctctctcttcagctggtcctcaagaagaattgtct
gatgagtcagttacaggaaaaatgtttcatgtcaagaataggatctcattcttagttgag
aagtataatgttttcttttctgaagttgaccaacttaaatggcgcttaactgaagttgca
ccagaccacaatatgcaggatgaaatgggggtgttggttgctgcaagtgatgcgttggct
gaatttagaacaagagaagtgaatctgaaccaacatctgagctttttaagtgatgaaaat
ggaaaactttctgaggaacttaataagcataaattcatggttgagaatgcgagtgctgaa
atcacaaagctgaatgctgaaattgaacaggagagaacaaggtatgctaatacaaaagag
aagcttagcttggctgtgacaaaaggaaaggcgttagttcagcagcgtgatgctttgaag
cggtcactgtctgagaaaactagtgaactggagaggtatcgaattgagttgcaagaaaag
tcaaatagtcttgaggctgctgaagaaaccaaggatttactggggagaagcgaaaattta
gctgcttcactgcaggaagctctcattcaaaaggagatgatacttcagaaatgtgaagaa
atattgtccaaggccactggaagtgagcaatttcagtcaagggatacaattcagaaagct
gagtggcttgcagatgagatgaatgcattgaatgagacatctttgcaactccaaagagtg
acagattccttatcatcatttgatttcccccagtccgtacaatcaaatggacctgatgca
caggttgcttggctcctggaatcattttatctggctaaaggagaagtaacaaaattacat
gagcagatggtagcagcaaaagaggccgcaaataatgagattggtcagcttactgcttct
cttgtggtagaagcacaggataaaagctatcttcaagaggaattggaggatttaaatcat
aaatatgcagtgcttgcccagaaagagcatgaggcttcaatggataaggataggatcatc
agtatgctgctagaggcttctaagatcaacacacatgatcaagaattggtgtatcaaagc
caatctgacatgactgtactcattaacagatgtgtagaaaatataaaagaagaaagtagt
gcctctcttgaatcctataagcatcaattcgagtcctttgagcagatccagagtaatttg
tacattagggatctggaattgaggctatatggtcaaatacttacagaagaggtgtctgat
aaagcagagttgaatagattgtcaaaccattcagtcaaggttactgaggaactttctgct
ttaaaggaagaaaaggaatctctggagaagaatctcgaacaatatgaggataaagtttcc
ttgcttagggaaaagttgtctatggcagttaaaaaagggaaggggcttgttcaagaacga
gaaaagttgaaaggagcattggatgagaagaatgctgaaatagagaagctgcagtcagat
ttgcatttgcaagaatctctatctaatgacaacagattgcagattgataagctcttggct
gagatggaccgtatccctcaactagaggctgatcttgttgctatgaaggatcaaagggat
caactagagcagttcttagtagaaaggaataacatgcttcaaaaggttatcgagtcactt
gatggtattgttcttccagctgatttgagttttcaagatcccataaaaaaggtcaaatgg
ctttcacgatacttaagtgaaagccaaactgcaaagatagaggcagagcaggagttggaa
agagtaaaagatgaagcaagttctttagccaacaaattgttggaggtccaggaatccatt
aaatccctagaagatgcattatctgccgcgcaaaacaacatctcacaactcttggaggac
aaaaatgagctagaagctgctaaggcattagttgaaaaagaattagagaaggcagtggaa
gaagcttctgctaaaagtgttgagtttgcaaatgtgttcgcagatagaaaatccgttgag
gatgctttgtctctggcggagaagaatgttttagtactaaagaatgagaaagaagaagct
ttacttggtaaagatgctgctgagtctgagctacagaaaatcaaggaggaattctctttc
catgccaacaaactaaagatggcagatgaaactaaacaatcccttgaggacgcactagtt
caggcagaaaaaaacatttctctgcttactgaggaaaataacagggtacaagttggtaga
gctgatttagagaacgagataaacaagctcaaaggggaagctgatttccagaacagtaag
ctaagtgctgcttccatgactataaagtcactagaagatgctttgctgagttcagaaaac
aaaatttctgatcttgttaatgaaaagaagaacgcagaagaggaaattgtagttctgact
tccaagttagacgcctgcaggcaagagttggctggatcacagggcagcacagaaactaaa
caatcccttgaggacgcactagttcaggcagaaaaaaacatatctctgcttactgaggaa
aataacagggtacaagttggtagagctgatttagagaacgagataaacaagctcaaaggg
gaagctgattcccagaacagtaaactaagtgatgcttccatgactataaagtcactagaa
gatgctttgctgaattcagaaaaccaaatttccagtcttgttaatcaaaagaagaacgca
gaagaggaaattgtagttctgacttccaagttagatgcctgcatgcaagagttggctgga
tcacagggcagcgtagaaactaaagttctagagctctctactcatcttagccgccttcag
ttccatctgagagatgatgctgtgttttcctctctccgaaaaagttttgaggaaaagttt
gagagcctaaaagacatggatcttattctcaaagaaatccgggattctttttctaaaata
gagactgaagtgctgccagattctcctactaaggatgactcatctttctcaattccttca
gtatatgttgtcaatgatgctctaaatgaggaatttgccaacggtgaaccaaatgcaact
gatggtgacaatgtcacattgcttctagggaaaattgtggatggattccaattgagaaac
aagattcttgctgagaacattggaagttattctgcattgatggatgatttgatcaaagat
atacttaaaaagctagagttgacaaaaagccaagctctacccttgattgaactgacagaa
tctcttaagcaaaaggtgaaagatgcagaagttggtagtctagcgcaggaaaatactata
caattgttggaaacggatcttaaagttctactctctgcttttaacgatgcaactgatgaa
ctggctttaactcaaaatagattatctgaacttggctccaactttgacctggtaaagttg
aaggaaccctcgcacgcacaattaggaaagtttggtgaagatgctgatcgcttagcgctt
gaaagcaccgagtctgcaaggactgctgagaagttgctattggcggctagacagagtcac
catctttctgaacaattcaaacctgtgatggatgtgatggttggtacaattaaagatttg
caggttaaattggaagaaagcaatagtacctgtgtgaaagtcttggaagaaaaggagttt
caccaagagaagatctcccatctggagactaatctagaagctttgaatgatctttgcagt
gagatgaggcttaaattggaggattatcagacaaaagaggataatatcaaggagaaagaa
gctgaacttttgtctctcaatgcccaagcttcacggaattttcaagaggctgaagactta
accctctcagcatttcttatgaaatctctttttgataaactaaatgggattgaaacactc
atggagcatgatgtgggagatgcagaggtctatgattcacctgatgtcagaaagctcttt
tatgtagttgatactttcccaaaattgcagctccagttgagctcactgtctcttgagaaa
aaagaattacaatcaagccttgagaaacaggcgctgcgaattgagcatttgaaggaggaa
gttgaagagtacactacagatgcggaagactacgaaaagatgaagaatgagttgttagaa
ttcacaattggtttggaaaatattatacagaagttggggagcaataatttggtcggtctc
cggaaagagactctggtgacagggttgttaccagtgcttgaaaagctaattgttgccaaa
gtctcggaatctgaaaatttgaaagcaaaaacagaggaactgcttgctgacttgcatggt
acccaaaaggttgttgaggacttgtcaagtaaggttaagtcactagaaaattctaatcaa
gctaaggttacaccacttgagatcaaccaagaaagaggcatcttggaagcagcttccttg
ccttctcagtcagagatatctgaagttcaggatgtggtaccggttagtaagaatttagct
tcttcttcagttacgtcagctgctcatgtccgaactttgcggaagggatctacagatcaa
cttgcaataaatatagattctgaatctgaacggttgatagatgacaaggaagctgaccaa
gaaaaaggtcatgcattcaagtctctcaatacatcaggtcttattccagggcaagggaag
atgattgcggacagaattgatggagtttgggtatcttcgagtcgagctttgatgagtcat
ccaaggggcaggctaggtcttattgcttattgtttgttgctgcatatttggttattgggc
accattttgtaa
DBGET
integrated database retrieval system
