Lycium barbarum (goji berry): 132641379
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Entry
132641379 CDS
T09483
Name
(RefSeq) AP-1 complex subunit gamma-2-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
132641379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132641379
Membrane trafficking [BR:
lbb04131
]
Endosome - Golgi transport
Others
AP-1 complex
132641379
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_2
PDS5
INTS7_N
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
132641379
NCBI-ProteinID:
XP_060214333
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All DBs
Position
5:124167319..124182806
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AA seq
879 aa
AA seq
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MNPFSSGTRLRDMIRAIRACKTAAEERGVVRKECAAIRAAISENDQDYRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSIKQDLNHTNQY
IVGLALCALGNIGSAEMARDLAPEVERLLKFRDPNVRKKAALCSIRIIKKVPDLAENFIN
PAAALLSEKHHGVLITGVQLCIDLCKVSTEALEYFRKKCTDGLVKLTRDLANSPYAPEYD
VSGITDPFLQIRLLRLLRALGQDDADASDAMNDILAQVATKTESNKNAGNAILYECVAAI
MSVEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKALAVDSQAVQRHQTTILECVKD
SDPSIRKRAVELVYLLVNESNVKPMTKELIEYLEASDPEFRGDLTAKICSIVEKFSPEKI
WYIDQMLKVLSEAGTDVKDEVWHSLIVVMTNASNLHGYAVRSLYRAVQATGEQETLVRVA
VWCIGEYGDMLVNDAGRLDIEEPLTVTESDAVDVVETSFKSHSFDLTTRAMCLIALLKLS
SRFPSCSQRINDIIVQHKGSFVLELQQRAIEFNSIIDRHQNIRPSLVERMPILDEATHSG
RKGGAVPAAVSTSQGVSVNLPNGVAKPSAAPLVDLLDLSSDDVPAPSSSGGDFLQDLLGV
DLAPVSSQSGTNQAQKSGTDVLLDLLSIGTPPANSIPSTTQASPSNFDTKSPVDLLDRMS
SPSAPSVQVSTTAGSSPMLDLLNGFPSSPPIAVTEGNGPAYPSMVAFESSSLKLTFNFSK
QPGNPQTTLIEASFTNKSQEVLTNFIFQAAVPKFLQLHLDPASGNMLPANSNGSITQKLK
LTNSQHGKKSLVMRIRIAYKVNDKDVLEQGQVNNFPRDL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttttcgtctggcacgcgtcttagggacatgattcgggctatccgtgcttgc
aaaactgcggcagaggagcgtggtgtagtaagaaaagagtgtgctgctatcagagctgca
atcagtgaaaatgatcaagactatagacatcgtaaccttgcaaaactaatgttcattcac
atgctgggttatcctacacactttggtcaaatggaatgcttgaagctgattgcttctcca
ggatttccagagaaaagaataggatatcttggcctaatgttgctgcttgacgaaagacaa
gaagttctaatgttggttaccaattcgataaagcaggatcttaaccacaccaatcaatat
attgttggacttgctctttgtgcgttagggaatattggttctgcagaaatggctcgtgac
cttgcaccagaagttgaacggttgctaaagtttagagatcctaatgtccgaaagaaggca
gcgctttgctctataagaattataaagaaggtccctgatcttgccgaaaattttataaac
ccagcagctgccttgttaagtgagaagcaccatggagttctcattactggtgtccagctt
tgtatagatctatgtaaagttagtacagaggctcttgaatatttcagaaagaaatgcacg
gatggtttagtcaaacttactagggatctcgcgaacagtccatatgcgcctgagtatgat
gtttctggcattacagatcctttcctccaaataagattgcttaggctcttgcgtgctttg
gggcaagatgatgccgatgccagtgatgctatgaatgatattcttgctcaggtggcaaca
aaaactgaatcaaacaaaaatgcaggcaatgctattctttatgaatgtgttgcagctatc
atgagcgtcgaagataatggcggcttgagggtgcttgctattaatattttgggaagattt
ttatccaaccgtgataacaatatcaggtatgttgcacttaacatgttgatgaaagcttta
gctgtagatagtcaagcagtgcagaggcatcagacaacaattttggaatgtgtgaaggat
tccgatccatcaattcgtaaaagagccgttgaacttgtgtatctcttagtaaacgaaagc
aatgtgaagcctatgacgaaggagttaatagaatatctagaagcaagtgatccggagttt
aggggagatctcactgccaaaatctgttccattgtggaaaagttctcacctgagaaaatt
tggtacattgatcagatgctcaaggttctctctgaggctggaaccgatgtgaaggatgag
gtgtggcattctctgattgtggtgatgacaaatgcttccaacctccatggttatgcagta
cggtctctatacagagcagtgcaagcaacaggggaacaggaaactctggttcgagttgcg
gtttggtgcattggagaatacggtgacatgttagtaaatgacgctggaaggcttgatatt
gaagaaccactgaccgtaacagaatctgatgctgtggatgttgtggagacttcctttaag
agccattcatttgatctcactactcgggcgatgtgtttgattgctttgttgaagctgtcg
agtcgctttccatcttgttcacagcggataaatgacatcattgttcagcacaaagggagc
tttgtgcttgaactgcagcagagagctattgaatttaactcgataattgacaggcatcag
aatatcaggccttcacttgtagaaagaatgccaattcttgatgaagcaacccacagcgga
aggaagggtggtgctgtgccagcagctgtgtcaacatctcaaggagtatcagttaatctt
ccaaatggagttgccaagcccagtgctgcccctcttgttgacttacttgatcttagttca
gatgatgttcctgcacctagctcttctggtggtgactttcttcaggatcttcttggtgtt
gatctggcgccagtgtcttcacaatcaggtacgaatcaagcccaaaagagtggtaccgat
gtgttactggatcttctgtcaattggaacaccacctgctaatagtatcccatctacaact
caggcgtcaccctccaattttgacactaaaagtccggtggatctactagatagaatgtcc
tcaccttctgctccttcagttcaagtctctactacagctggaagttctcctatgttggat
ttattgaatgggttcccttccagcccaccaattgctgttacagaaggcaatggtccagca
tatccatcaatggttgcatttgagagcagctccttaaaattaacgttcaacttctcaaag
cagcccggaaacccacagacaacacttattgaggctagttttacaaacaagtcacaagaa
gttctcacaaactttatttttcaagctgcagttccaaagtttcttcaactgcacttggat
ccagcaagtggtaatatgctacctgcaaatagtaacggatcaatcacgcaaaagttgaaa
ctcacaaacagccaacatggcaagaaatcccttgtcatgcgcatacggatagcttataag
gtgaatgataaggatgtattggaacaaggccaagtaaacaattttcctcgtgatttgtga
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