Lycium barbarum (goji berry): 132641520
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Entry
132641520 CDS
T09483
Name
(RefSeq) alpha-amylase 3, chloroplastic isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00500
Starch and sucrose metabolism
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
132641520
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
132641520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
132641520
NCBI-ProteinID:
XP_060214530
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Position
5:128470861..128486592
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AA seq
908 aa
AA seq
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MSTLTIEPLVGNYLRRSPKLYENTKTTPHFFLNYCRRPQLSRKATLRFCNSGRRRTLPLR
ASSTDAAVLDTSEKSDVVLTETFSLKRPQRAEGKIAIRLDKGKDEENWHLSLGCTVPGKW
ILHWGVHYTGDVGSEWDQPPPEMRPSGSIAIKDYAIETPLKGETLQEVKIDISSKWSIAA
INFVLKDEETGDWYQHKGRDFKIPLTDYLEDDANTVGGKEGSGIWPGFHFLLRNAYRPLG
QLSNILLKPEAAPSKEESSSNDGPSVKNRRLEGFYEEHFIGKETIVDNTLSVSVKQCPET
AKNILYIDTDLPGDVILHWGVCKDDAKRWELPAMPYPAETVVFKNKALRTLLQRKEGGNG
SSGQFTLDGGLSGFVFAVKLDDDTWLNCKGNDFYIPLSSSKHQSSTIHLEERKQNEESNS
SKIVNSSPEENQTVSVYTDDIIKEIRNLVSDISSEKSRKTKSKEIQETILQEIEKLAAEA
YSIFRSSSPAMSKIVVSEAEVSQADVKVSSGTGTGFEILCQGFNWESHKSGRWYKEMHEK
AAELSALGFTVIWLPPPTDSVSPEGYMPTDLYNLNSRYGSFDELKVTVKKFHEVGIKVLG
DVVLNHRCASERNQNGIWNIFGGRLNWDERAVVSDDPHFQGRGNKSSGDNFHAAPNIDHS
QDFVRKDIKEWLLWLREEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLIYT
YGEMDHNQDAHRQRIVDWINATNGTAGAFDVTTKGILHSAIGRCEYWRLSDQKGRPPGVV
GWWPSRAVTFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPSVFFDHIFSGNRSEIG
NLISLRKRNKIHCRSTVEITKAERDVYAAVIDDKVAVKIGPGHYEPPNGHQRWKMAAEGN
DYKVWELS
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacttactatagagcctctcgtcggcaattatctccgacgaagcccaaaactt
tatgaaaatacaaaaacaacccctcatttttttcttaattactgccggagaccgcaactt
tcccgtaaggcaactttgagattctgcaactcagggcgtagacggacgttacctctaaga
gctagctccaccgatgctgccgtccttgacacgtcggaaaagtctgacgtcgttttaacg
gagactttctcgttgaaacgaccccaaagggctgaaggaaagatagccatcagattggat
aaggggaaggatgaagagaattggcacctctctctgggatgtactgtgccgggaaaatgg
attcttcactggggggtccactatactggtgatgttggcagtgaatgggatcaacctcct
ccagagatgcggccctcgggttcaatcgccataaaggattatgcaattgaaacccctttg
aaaggagaaacacttcaagaggtgaagattgacataagttctaagtggtctattgcagct
ataaattttgttttgaaggatgaggaaactggagattggtatcagcacaaagggcgggac
ttcaagattcctcttactgactaccttgaagatgatgctaatactgttggaggtaaagag
ggatcagggatatggccagggtttcactttttgttgcgaaatgcataccgaccgctaggg
cagctgtcgaacatcctccttaagccagaagctgctccttctaaggaggaatcaagcagc
aatgatgggcctagtgtgaaaaacaggcgtcttgaaggattctatgaggagcatttcata
ggaaaagagactattgttgataacacattgagtgtctctgttaagcagtgtccagagact
gccaagaatattttgtatatagataccgacttacctggagatgtaattcttcactgggga
gtctgcaaagatgatgctaaaagatgggaacttcctgcaatgccatatccagcggaaaca
gtagttttcaagaataaggcactgcggactttgctccagagaaaagagggaggcaatggt
tcttcgggacagttcactttggatggaggactttccggatttgtttttgcggtgaagctg
gatgatgatacgtggttaaattgtaagggaaacgacttttatatacctctgtcaagtagc
aagcatcagtctagcaccatacatttggaggagagaaaacaaaacgaggagtcaaattct
tccaagatagtcaacagttcacctgaggagaatcaaacagtgtctgtgtatactgatgat
ataataaaggagataaggaatttggtgagtgacatttcctctgaaaagagccggaagaca
aaaagcaaggaaatacaggaaaccattcttcaagaaattgagaagcttgctgcagaagct
tatagtatattcagaagttcaagcccagcaatgtcaaaaattgtggtttctgaagctgag
gtttcacaagctgacgtgaaagtatcttcaggaaccggtacaggatttgagattttgtgc
cagggttttaattgggaatctcataaatctggaagatggtacaaggagatgcatgaaaaa
gctgcagagttatctgcacttggatttactgtcatctggttacctccaccaactgactca
gtgtcaccagagggatacatgcctacggatttatataacttaaattccagatatggtagt
tttgatgaattgaaagttacagtaaagaaattccatgaagtgggcatcaaggttcttggt
gatgttgtcttaaatcatagatgtgcaagtgaacggaatcaaaatggtatatggaatatc
tttgggggtcggttaaattgggatgagcgtgcagttgtttctgatgatccacatttccag
ggaaggggcaataaaagtagtggagataatttccatgctgctcctaacattgatcactcc
caggatttcgtgagaaaggatatcaaggaatggttgctctggctgagggaggagattggt
tatgatggatggaggctggattttgttcgtggtttctggggtggttatgtgaaggattac
ttggaagcaactgagccttacttcgctgtgggcgagtattgggattccctcatctatact
tacggagagatggatcacaatcaagatgcgcatcggcagagaattgttgactggattaat
gctactaatggaactgcaggagcatttgatgtgacaacaaagggaattcttcattctgca
attgggagatgtgaatactggcgattatcggatcagaaaggaagacctcccggtgttgtt
ggatggtggccatctcgtgctgttacctttatagagaatcatgatacaggttctacacag
ggtcattggagatttcctggtgggaaggagatgcaaggttatgcctatatcctgactcac
cctggaaccccatcagtcttctttgatcacattttctctggtaatcgatctgaaatagga
aatcttatctcactcagaaagcggaacaagatccactgtcggagtacggtcgaaataaca
aaggccgaaagggatgtttatgcggcagttattgatgataaggtagctgttaaaatagga
ccaggccactatgagcctccaaatgggcatcagagatggaaaatggctgctgagggtaac
gattacaaggtttgggaattgtcatga
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