Lycium barbarum (goji berry): 132641751
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Entry
132641751 CDS
T09483
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132641751
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132641751
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132641751
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
132641751
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class I (G)
132641751
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132641751
Prokaryotic type
132641751
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1
CysS_C
Motif
Other DBs
NCBI-GeneID:
132641751
NCBI-ProteinID:
XP_060214819
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All DBs
Position
5:complement(135911117..135918344)
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AA seq
570 aa
AA seq
DB search
MNKGKDKVEFQVYNTMTRQKEVFKPKEAGKVKMYVCGVTSYDFSHIGHARAYVAFDILYR
YLKYMGYDVVYVRNFTDVDDKIIKRANELGEDPKALSGRYCQEFLKDMDDLHCLQPTHQP
RVTDHMEQIKEMIAKMSAFFLMLMFLSCHLQIMANGCAYTIDGDVYFSVDSFPEYGRLSG
RKLEDNRAGERVGVDSRKQNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAYYL
THSFDIHGGGMDLTFPHHENEIAQSCAACRESNISYWMHNGFVNIDDEKMSKSLGNFFTI
REVTRLYHPLALRYFLLGNHYRSPVNYSISQIEIASESVFYIYQTSHDSEEALSVFQQGT
ETATKVRGRVSPQAQECITKLRSELETKLSDDLHTPTILNAALQEALRLMNSYLNMLKKK
QQRQQHLTAFLSLTELLKEVKAILDVLGLLSSSTCAEVLQQFKERALKRAELTEEDVLHA
IEERTLARKNKEFSRSDQIRTDLVAKGIALMDIGTETVWRPCVRPEQEQPAAPAQSNQSA
AAVREQPVAPSQQMQSAAAPQTEQLAVPPQ
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggggaaggataaggtggaatttcaagtgtacaatacaatgactaggcaaaag
gaagtgttcaaaccaaaagaagctggaaaagtcaaaatgtatgtgtgtggtgttaccagt
tacgatttcagtcacatcggtcatgcccgtgcctacgtcgctttcgacattctctacaga
tatctgaaatacatgggatatgatgttgtgtatgtgcgcaacttcactgatgtagacgac
aagataattaagcgggctaatgagcttggagaagacccaaaagctttgagtggtcgatac
tgccaagagtttcttaaagacatggatgatctccattgcctccaaccaactcatcagcca
cgtgttactgatcatatggagcagattaaagaaatgatagctaagatgtctgctttcttc
ttaatgcttatgttcctgagctgtcacctgcagataatggctaatggctgtgcatacaca
atcgatggagatgtttatttctctgttgatagttttccagagtatggtcgattatccgga
cgaaaattagaagataatcgagctggagaacgagttggagttgattcaaggaagcaaaat
cctgctgactttgccttgtggaaggctgcaaagcccggtgaaccaagttgggagagcccc
tggggtcctgggagaccaggttggcatatagaatgcagtgcaatgagtgcgtactatctg
acacattcctttgatatacatggtggtggaatggacttgacttttcctcaccatgaaaat
gagatcgcccagagttgcgctgcttgccgggagagtaatattagctactggatgcataat
ggttttgtgaacatagatgacgagaaaatgtcgaaatcattggggaacttcttcactata
cgtgaggttactcgattgtaccatccccttgcattgaggtacttcttgttgggaaatcac
taccgatctccggttaattactcaatatcacagatagaaattgcttcagaatctgtgttc
tacatttatcagacctcacatgatagtgaagaagccctctcagttttccaacaaggaact
gaaactgcaacaaaagtaagggggcgtgttagccctcaggcccaagaatgcatcacgaag
ctgcgtagtgagttggagacaaaactctctgatgacttgcatacacccacaattttaaat
gctgctcttcaagaagcgcttcgactcatgaatagttatttgaacatgctgaagaaaaag
cagcaaaggcaacaacatttaactgcttttttgtccctaaccgagctcctgaaagaggtg
aaggcaatattggatgtccttggcttgctttccagttcaacatgtgctgaggttttgcag
cagtttaaagagagggcattgaaaagggctgagttgacagaggaagatgttttgcatgca
atagaggaaagaacactagcaaggaaaaacaaggagttctctagaagtgatcagatcaga
actgatttggtggcaaagggtatcgctttaatggatatagggacagaaacagtgtggagg
ccttgtgtaagacccgaacaagaacagcctgctgcaccagctcaatcaaatcagtctgct
gcagcagtgcgtgaacagcctgttgctccatctcaacaaatgcagtctgctgcagcaccg
caaactgaacagcttgcggtgccacctcagtag
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