Lycium barbarum (goji berry): 132641891
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Entry
132641891 CDS
T09483
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03020
RNA polymerase
lbb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132641891
09124 Replication and repair
03420 Nucleotide excision repair
132641891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132641891
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132641891
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
132641891
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
132641891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
132641891
NCBI-ProteinID:
XP_060214975
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All DBs
Position
5:complement(139729517..139734835)
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AA seq
320 aa
AA seq
DB search
MEGVSYQRFPRIKIREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS
VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV
TSKDLLSSDHTVVPVDYTDASSGFDNNATNKGIIIVKLRRGQELRLRAIARKGIGKDHAK
WSPAATVTFMYEPEIYINEDMMETLSLQEKTELVDSSPTKVFGIDPDSKQVILVEPEAYT
YDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLS
DDTVEADDQFGELGAHMRGG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtgtcgtaccaaagatttccaagaatcaaaatccgtgaagtaaaagacgac
tttatgaaattcgagttacgcgacactgacgcgagtatagcgaacgcgcttcgtcgtata
atgatagctgaagttccgacaatagcaatagacctcgttgaaatcgaagtgaattcatct
gtcttaaatgacgagtttatttcacatcgtttaggacttgttccgttaactagtgaacgt
gctatgagcatgaggttctcacgtgactgtgatgcttgtgatggtgatggacagtgtgaa
tattgttctgttgagttttatttgagagttaagtgtttgagtgaccagacattggatgtt
actagtaaggatttgttgagttctgatcatactgttgttcctgttgattataccgatgct
tcttcgggttttgataataatgccactaataagggaatcataattgtgaagctacgacgt
ggacaggagctaaggctaagagcaatagcacggaaaggaattggcaaagatcacgcgaaa
tggtcgcctgcagcaactgtgactttcatgtatgaaccagagatctacatcaatgaggac
atgatggagaccttgtctctccaggagaaaacagaattagttgacagtagtccaacaaaa
gtctttggcattgaccctgacagcaaacaggttattctggttgaacccgaggcttatact
tatgatgatgaggtgctcaaaaaggctgaagccatgggaaaacctggacttgtagagata
catgccaaggaagatagctttattttcaccgttgagacgactggtgcagttaaagcttca
caattggtgctcaatgcaatagaagttctgaagcagaagttggatgcagtacgcctgtca
gatgacaccgtggaagcagatgatcagtttggagagttgggtgcacatatgcgcggaggt
taa
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