Lycium barbarum (goji berry): 132641895
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Entry
132641895 CDS
T09483
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132641895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132641895
03110 Chaperones and folding catalysts [BR:
lbb03110
]
132641895
03029 Mitochondrial biogenesis [BR:
lbb03029
]
132641895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132641895
Enzymes [BR:
lbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132641895
Messenger RNA biogenesis [BR:
lbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132641895
Chaperones and folding catalysts [BR:
lbb03110
]
Heat shock proteins
HSP60 / Chaperonin
132641895
Mitochondrial biogenesis [BR:
lbb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132641895
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132641895
Exosomal proteins of other body fluids (saliva and urine)
132641895
Exosomal proteins of breast cancer cells
132641895
Exosomal proteins of colorectal cancer cells
132641895
Exosomal proteins of bladder cancer cells
132641895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MukB_hinge
Motif
Other DBs
NCBI-GeneID:
132641895
NCBI-ProteinID:
XP_060214982
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All DBs
Position
5:complement(139824039..139831186)
Genome browser
AA seq
627 aa
AA seq
DB search
MSCSLNPLHAITLKNGSVHRISKRVSCSMLNTRAMAKELYFNHDGSTTKKLLVIMDFFFL
YFLELLLSLFHFMAGVDLVAELVGVTLGPKGRNVVLANKYGPPKIVNDGETVLKEIQLDD
PLEHVGVKLVREAGAKTNNLAGDGCTTSIVLARGLIAEGVKVTAMGANVVQVSRGIEKTA
KALISELKLMSREVEDHELEDVAAVSAGNDYAIGKMISEALRRVGKKGVVTIEKGNYTET
NLEVVEGMQFDRGYLSPYFVTDRRKRIVELHDCKLLLVDKKISNPKELVKILDNAVKEKY
PVLIIAEGIEQDALAPVIRNKLRGVLKVAAIKAPSFGERKSHCLDDIAILTGGTVIRDDM
GLTLENAHKALLGSASKVVITKDSTLIVTDGNTRADVMKRVSLIQNLVENTEENFQKKIL
NERIARLSGGIAIIQVGAQTQVELKDKQLRIEDALNAARAATEEGVVVGGGCCLLRLSLK
VDAIKEKLDNEDQKIGADIFKRALSYPAKQIAKNAGVNGNIIVEKILSVDNMKYGYNAAR
DRYEDLMAAKILDPTKVVRCCLEHAAAVAKTFLKSDAVVIDIPEPVSRIRRPPPMPTPGT
PSPTNNYNRSKAHWSHRSRGKWSFVQT
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagttgttctttgaatcctttacatgcaattactttgaaaaatggctcagtacacaga
atttctaaaagagtttcttgttctatgttgaatacaagagctatggctaaagaattgtac
tttaaccatgatggttctaccacaaagaaacttttggtcattatggatttcttttttctt
tattttcttgaactattactctctctgtttcattttatggcaggtgtggatttggtggca
gagcttgtaggtgtaactttgggtccaaaaggaaggaatgtagttcttgcaaataagtat
ggtcctcccaagattgttaatgatggtgaaactgttcttaaagagattcagctggacgat
ccccttgaacatgtcggagtaaaattggttagggaagccggtgccaagactaataatctt
gctggcgatggttgcacaacatctatagtgcttgctcgaggtctgattgctgaaggtgtc
aaggttactgcaatgggtgcaaatgttgtccaagtgtctcgtggaattgagaaaactgct
aaagccctcatttctgagctcaagttgatgtccagagaggttgaggatcacgagctggaa
gatgttgctgctgttagtgctggcaatgattatgccatcgggaagatgatttcagaagct
cttaggcgggtcgggaaaaaaggtgttgtcacaattgagaaagggaactatactgaaacc
aatctagaagttgtagaaggaatgcagtttgatcgtggctatttgtcaccttattttgta
actgatcgacgaaagaggattgtggagcttcacgattgtaagttgctattggttgataaa
aaaatttcaaacccgaaggagttggtaaaaattttggacaatgcagtaaaggagaaatac
ccggttttgataatcgcagagggcattgagcaggatgcgctggctccagtaattaggaac
aaactcaggggtgtcctaaaggtagctgcaataaaagctccatctttcggggagcgcaag
agccattgcttagatgacattgctatcttgactggaggaactgtgatcagagatgatatg
ggcttgactcttgaaaatgctcacaaggccttgttgggcagtgcttcaaaggtggtaatt
actaaggactccacattgatagttactgatggaaatactcgagcggatgttatgaagagg
gtttctctgatacagaatcttgttgagaacacagaagaaaatttccaaaagaaaatcttg
aacgaaagaattgcaagattatctggtggtattgccatcattcaggtgggggcacaaaca
caggttgagttgaaagacaaacaattaaggattgaggatgcccttaatgctgcaagggct
gctacagaggaaggagtagttgtgggtggtggctgttgtcttctgagactatcattaaaa
gtggatgctatcaaagaaaagctagataatgaagatcagaagataggagctgatattttc
aaaagagcactatcctatcctgcaaaacagatagcaaagaatgctggtgtaaatggaaat
atcattgtagagaagattttgtcagtcgataacatgaaatatggatataatgctgcaaga
gacagatatgaagatctgatggctgccaaaattttggatcctacaaaggttgttagatgt
tgcctagaacatgcagcagcagttgccaagaccttcctgaaatcagatgccgttgttatt
gacatcccggaaccagtatccagaataagacgaccaccaccaatgccaactccaggtact
cctagtcccaccaacaactataataggtccaaggctcactggtctcacaggtctaggggc
aagtggtctttcgtccagacataa
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