Lycium barbarum (goji berry): 132641990
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Entry
132641990 CDS
T09483
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00531
Glycosaminoglycan degradation
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
132641990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lbb00536
]
132641990
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
132641990
Glycosaminoglycan binding proteins [BR:
lbb00536
]
Heparan sulfate / Heparin
Enzymes
132641990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
132641990
NCBI-ProteinID:
XP_060215159
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Position
5:141975909..141979478
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AA seq
519 aa
AA seq
DB search
MMVSRTRLFCLLVFLVSSCFFRLSNSDELKLMVKGVTSIAQTDDNFICATLDWWPENKCD
YNQCPWGKAGLLNLDLKNRILANAVKAFNPLRIRIGGSLQDQVYYKVGKFPKNCSNFEKK
SDGLFGFSDGCLHMNRWDELHGLFNKTGAAITFSFNALLGRIQSDEDNTLWEGDWNQYNA
KSLMKYTIKKGYRIDSYELGNELCGGGVAAKIKAQQYGNDVKKLKRLVTHMYPDPTNRPK
ILAPGGFYDEQWFKEFLQTTGPGVVDGLTHHIYNLGAGRDPTLINKLQNPFYLSQIAQTF
KNVENSAKLFSPSSGPWVGESGGAYNSGGKTTSHTFVNGFWYLDQLGMTSTFNHKVYCRQ
SLIGGNYGLLNTTTSIPNPDYYGALLWHKLMGKNVLSATHEGSPYLRTYAHCSKTSGITV
LLINMDKSTTYEVSVVDDLNLYPDSVESIHEREEYHLTPKDGNIQSDVLLLNGTPLKLTS
SLDIPEMNPKLIDPTLPIGVAPRSIVFATLRGFQAPACA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttcaagaactaggttgttttgtttattggtttttttagtgtcatcatgtttt
tttcgtttgtctaattcagatgaattgaaattgatggtgaaaggagttacatctattgct
caaacagatgataatttcatatgtgcaactttagattggtggccagaaaataagtgtgat
tataatcaatgtccatggggaaaagctggtctccttaatctggacttgaaaaacaggatt
cttgcaaacgccgttaaagcattcaatcctctaagaatcagaataggaggttcactgcaa
gatcaagtttattataaagttggaaaattcccaaagaattgctcaaactttgagaaaaaa
tctgatggcctttttggatttagtgatggttgtctccacatgaatagatgggatgaattg
catggtctgttcaacaaaacaggggctgcaataacattttcattcaatgccttacttgga
agaatacaatcagatgaagataatactctttgggaaggcgattggaatcagtacaatgca
aagtcattgatgaaatacactatcaaaaagggatacagaattgactcatatgaattaggt
aatgagctttgtggaggaggagtggctgcaaaaataaaagctcaacaatatggcaatgat
gtcaagaaactaaagagacttgtaacacatatgtaccctgaccctacaaatagaccaaaa
atcttggcccctggtggattttatgatgaacaatggttcaaagaattccttcaaactact
ggaccgggcgtcgtggatggattgacacatcatatttacaaccttggagcaggaagggat
ccaactctgattaacaaacttcagaatccattttacctcagtcaaatagctcaaacattc
aaaaatgttgaaaattctgctaagttattttcaccatcatctggaccttgggttggtgaa
tctggtggagcttacaatagtggtggcaaaactacttcacatacttttgtcaacggcttc
tggtatttggatcagttgggaatgacttcaactttcaaccataaggtatactgcagacaa
tctttaattggaggaaactatggtcttctcaacactacaacttccatcccaaatccagat
tattacggtgctcttttatggcataagctcatgggaaagaatgtgctttctgctactcat
gaaggctctccttacttgcgcacttatgctcattgctcaaaaacaagtggtattacagtt
ctactaattaacatggacaagtcaacaacctatgaagtctctgtggtggatgacttgaat
ttgtaccctgatagtgttgaatctatacatgaaagggaagagtaccatttaactccaaaa
gatggaaacattcaaagtgacgtgttgttgctaaatggcactccattgaagctcacttcc
tcattggacattcctgaaatgaatcctaagctcattgatccaacgttgcccatcggtgtt
gctcctcgttctatcgtctttgctaccttgagagggttccaggctcctgcttgtgcatag
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