Lycium barbarum (goji berry): 132642138
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Entry
132642138 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132642138
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132642138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132642138
Spliceosome [BR:
lbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
132642138
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
132642138
NCBI-ProteinID:
XP_060215387
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Position
5:complement(5234320..5239085)
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AA seq
487 aa
AA seq
DB search
MEIVFKRLLLMWKEAEDCGAASDQDHGRTVSHGKQSLTIDVRRGCPFLDTVNRQVLDFDF
EKKCSVSSRTLNVYACLICGKYYQGKGKNSYAYRHSNEAGHNIYINLQTEKIYCLPDGYE
VKDPSLDDIRLVLNPRFMLEQVKQLDKNRQWSRALDGSDYLPGTVGLNNIKEKTDFVNVA
IQSLMRVTPLRNFFLIPENYQHTRSPLVHRFGELTRKIWHARNFKGQVNPHLFLEAVIES
SEKRFLIDMQSDPAEFMSWLLKTLDADLRGSKKGNTIIQQCFQGEMEVVKEIHSRSIAER
GENGDTDNIIMKTSRMPFLMLDLDLPPAPLFKDVMEENIIPQVPLFNILKKFDGETVTEV
AHPHIARMRYRITKLPQHLILHMRRFTKNNFFEEKNPTLVNFPVKNLELKDYIPLPAPQQ
NRKLRSKYDLIANTVHDGRPGEGSYGVFVQRKSEDLWYQVQDLHVSETLPQMVALSEAYM
QIYEQQR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggagatagttttcaaaagactcctactgatgtggaaagaggcagaagattgtggagca
gcttctgatcaagatcatggcagaaccgtcagccatggaaagcaaagtcttacaattgat
gtaagaaggggctgcccttttcttgatacagttaatagacaggttttagattttgacttt
gagaaaaaatgctcggtctccagcagaaccttgaatgtctatgcatgtttgatttgtggg
aagtactatcaaggaaagggtaaaaattcctatgcatatagacacagtaacgaagcaggg
cacaacatatatatcaatctgcagactgagaaaatttattgccttcctgatggatatgaa
gtaaaagacccatcacttgatgacattcgcctcgttctgaatccaagatttatgctggag
caagttaaacagcttgacaaaaacaggcaatggtccagggcacttgatggatctgattat
cttccaggaacggttgggcttaataacatcaaggagaagactgattttgttaatgtggca
attcagtctttgatgagagtaactcctcttagaaacttctttttaatccccgaaaactat
cagcatacgagatctcctctggttcatcgatttggagagctcacacgaaagatttggcat
gcaagaaatttcaagggacaggtgaatccacatttgttcttggaggctgttatagaatca
agtgaaaaacgatttctgatagacatgcagtctgatcccgctgaatttatgtcatggctt
cttaaaaccttggatgctgatcttcgaggttcaaaaaaagggaacaccataattcagcag
tgctttcagggtgagatggaggttgtgaaagagatacacagtagatctattgctgagagg
ggagaaaatggggacacagacaatattattatgaagaccagcagaatgcctttcttaatg
cttgaccttgatttgccacctgctcctctttttaaggatgttatggaggaaaacattatc
ccacaggttccgctgttcaacatattaaagaagtttgacggtgagactgtgactgaagtt
gcgcacccccatatagctaggatgagatatcgcatcacaaaacttccacaacatctaatt
cttcacatgcgtcggtttaccaagaacaacttctttgaggagaagaaccccacccttgtt
aacttccctgtgaagaatttggagctgaaggattatattcctctccctgcaccccagcag
aacagaaaactgcgctcgaagtatgatctgattgccaataccgttcatgatggcaggcca
ggagaaggatcatacggagtatttgtgcagcgaaaatccgaagacctttggtatcaagtg
caggacctacatgtttcagaaactcttcctcagatggttgcactctctgaggcttatatg
cagatctatgaacaacaacggtga
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