Lycium barbarum (goji berry): 132642209
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Entry
132642209 CDS
T09483
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Module
lbb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132642209
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
132642209
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Motif
Pfam:
Pectinesterase
PMEI
Tubulin_C
DUF6520
Metaviral_G
Pect-lyase_RHGA_epim
Cadherin_C_2
DUF2140
Motif
Other DBs
NCBI-GeneID:
132642209
NCBI-ProteinID:
XP_060215449
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Position
5:4567239..4569616
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AA seq
558 aa
AA seq
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MGVKKLAIASIASILLVACVVAVAISFTSKSNEDNSSNNTSNNKVDSHISTSTKSVHAIC
QSTDYKQTCEKSLARANNTNDPKDLIKVEFSATINDLSSVIKSSKSLIQEASKDPRTKDA
LHTCEGLLGVAIDDLRRSFDDINVLDVTKLQDYTDDLKTWLSAAITYQETCLDAFENTTG
ETGEKMKKLLKNAGELTSNGLAMVSSFGSVLKNLNLKIPGVNRRLLNTHERMLQEVNSNG
LKPNVVVALDGSGQYKSINEALRAVPQKNTQKFVIFIKAGVYNEYVEIPRKVNNVVFIGE
GPTKTKITGSKNFADGTGTFKTATVAVNGDNFMAKDIGFENTAGPIKHQAVALRVSGDMA
IFHNCQIDGYQDTLYVHSYRQFFRDCTISGTIDFIFGDASAVFQNCKMIVRKPMAEQACM
VTAQGRKDRRGVGAIVMQNCQVLAEQDFLTAQPPIKAYLGRPWKEFSRTIIMQSSIDGFI
APEGWSVWAGNFALDTLFYAEYQNRGAGSNTNNRVNWRGYQKNIAPQVAAGFAPGPFIRA
DEWVKLSGVPYESGLMKV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaagaagcttgcaattgctagcattgcttcaattcttctagtggcttgtgtg
gtggcagtagctatctcattcaccagcaagagtaatgaagataattcatccaataatact
agtaataataaagttgattctcatatttcaacttctacaaagtctgtccatgcaatttgt
caatctactgattacaaacaaacttgtgaaaagagcttagcaagggccaacaacactaat
gatccaaaagacctcattaaggttgagtttagtgccacgattaacgatctctctagcgta
atcaagagttccaaatcgttaatccaggaagcctcgaaagatcccaggactaaagacgcg
ttgcacacatgtgaaggcctcctgggtgtcgcgatagatgacctgaggaggtcattcgat
gatatcaacgtgctagacgtgaccaagcttcaggattacactgacgaccttaaaacatgg
ctcagcgcggccatcacttatcaggaaacgtgtttggatgcttttgagaacacgaccggt
gagacaggtgagaaaatgaagaaattattgaaaaacgcgggggagctcacaagcaatggt
ttagctatggtttcgagttttggttcagtactcaaaaacctgaacctgaagatccctggt
gtaaaccgaaggttattaaatactcatgaaaggatgctccaagaagttaattctaatggg
ctaaagcctaatgttgtggttgcacttgatggtagtggacaatataagtctattaatgag
gccctaagagctgtgccccaaaagaatacacaaaaatttgttattttcatcaaggctggt
gtttacaatgagtatgttgagatcccaaggaaagtgaacaatgttgtgtttattggtgaa
ggcccaaccaaaaccaaaattactggtagcaagaactttgctgatggcactggcactttt
aaaactgccacagttgctgttaatggagacaacttcatggcaaaggatatcggattcgag
aacacagctggaccgataaagcaccaagctgttgctcttcgtgtctcgggtgacatggcc
attttccacaactgtcaaatcgacggttatcaagacaccctatacgtccactcctatcgc
caattcttccgcgattgcaccataagtgggaccatcgacttcatctttggggacgcctca
gcagtgttccaaaactgcaaaatgatcgttagaaaaccgatggcggaacaagcctgcatg
gtcactgcacaaggacggaaagatagacgtggggttggtgctatagtcatgcaaaattgc
caagttttggctgaacaagattttctaacagctcaaccacctattaaggcatatttagga
agaccatggaaggaattttcaagaactattataatgcaatcttcaattgatggatttatt
gcaccagagggatggtcagtatgggcaggaaattttgcacttgatactttgttttatgca
gagtatcaaaataggggagctggatcaaatactaataatagggtaaattggaggggttat
cagaaaaatattgcaccacaagttgctgctggatttgcccctggaccttttattagggct
gatgagtgggttaaattgagtggtgttccatatgaatctggtttgatgaaggtttga
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