Lycium barbarum (goji berry): 132642837
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Entry
132642837 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132642837
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132642837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132642837
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
132642837
DNA repair and recombination proteins [BR:
lbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132642837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
132642837
NCBI-ProteinID:
XP_060215845
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All DBs
Position
5:140391303..140397177
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AA seq
322 aa
AA seq
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MSKQSVRKHNALEKHREKEKTRSNNTTNFLLSKHWKKIYPIGLHKTGSSLSLSSLSLSLS
QTSNDSSVTDSSSITPLDQKISLALRLIGSSTEKKEGPATSKNVARAVSPTRNPSPSPST
EEELMRRCNWITSSSDKVYVQFHDDCWGVPVYDDHQLFELLALCGMLMDFNWTEILKRRE
QIREAFGGFNANHVAKIGEREIEELISNTSLNLAESRVRCIVDNAKCIVKIVREFGSFSS
YMWNYVDYKPIINRFRHPRNVPLRTPKAETISKDLLKKGFRFVGPVIVYSFMQAAGMTID
HLVDCFRHKDCVNLAERPWRHV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcaaagtgtgagaaaacataatgcattagagaaacatagggaaaaagagaag
acaagaagcaataatacaacaaacttcttattatctaaacattggaagaaaatataccct
atagggctacataaaacaggctcttctctctcactttcttcactttctttatctctatca
caaacttcaaatgattcttctgttacggactcttcttcaatcactccgctggatcagaaa
atctctctggcactccgattaatcgggtcatcaacggagaaaaaagagggtccggccacg
tccaagaatgtggctcgagcagttagtccaactcgtaatcctagtccaagtcctagtact
gaagaagaactcatgaggaggtgcaattggataactagtagtagtgataaggtttatgta
cagtttcatgatgactgctggggagttcctgtttatgatgaccatcaattattcgagctt
cttgcgttatgtggaatgctgatggatttcaattggactgaaattttaaagagaagggaa
caaataagagaagcttttggtggatttaatgcgaaccatgtggccaaaataggggagaga
gagattgaagaattaatctcaaatacatcactcaatttagcagaaagcagagttagatgc
atagttgacaatgccaagtgcatagttaagattgtgagagaatttggatcattcagcagc
tacatgtggaattatgtggattacaaacctataataaacagattcagacatccaagaaat
gttccattaagaacaccaaaagcagaaacaattagcaaagatttattgaagaaaggattc
agatttgttggaccagtaattgtttattcattcatgcaagctgcaggaatgacaattgac
catttggttgattgttttaggcacaaagattgtgtaaatcttgctgaaagaccatggagg
catgtataa
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