Lycium barbarum (goji berry): 132643516
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Entry
132643516 CDS
T09483
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00740
Riboflavin metabolism
lbb00790
Folate biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
lbb01240
Biosynthesis of cofactors
Module
lbb_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
132643516
00790 Folate biosynthesis
132643516
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
132643516
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
132643516
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Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
Motif
Other DBs
NCBI-GeneID:
132643516
NCBI-ProteinID:
XP_060215929
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Position
6:complement(16942128..16946420)
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AA seq
524 aa
AA seq
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MDSIMFKHPSVPRILINSTSFGSSQIVGLNHYRKRLVFPNLNTTCWATGISGDSFNENPF
ESNKNGSVFETLSAEITPETTDFFVSETEGDPDCPSKGYSSIGGAIAALNEGKFVIVVDD
ESGEVEGNLVMAASFVSTETIAFMVRHGSGIISVGMKEEDLERLNLPLMSPEKEDDSSAP
SFTITVDAKMGTSTGVSASDRAKTVLALSSPTSTPEDFRRPGHVFPLKCRNGGVLRRFGH
TEASVDLVMSAGLQAVSVLSAIVDKNDGSIASMLILENLALEHKIPIVSITDLVRYRRKR
EKLVERTAVSPLPTKWGLFQAYCYRSKLDGTEHIAVVKGDIGNGEDVLVRVHSECLTGDI
FGSRRCDCGNQLDLAMQLIEEAGRGLVIYLRGHEGRGIGLGHKLQAYNLQDQGHDTVEAN
LELGFAADAREYGIGAQMLRDIGVRTMRLMTNNPAKFTGLKGYGLAVVGRVPVLTPFTDE
NRKYLETKRTKMGHMYGSDVQGPIKASIKRSSEKQYPPQERKES
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcatgtttaagcatccatcagttccaagaatcttgatcaactcaacatct
tttgggagttcacagattgttggacttaaccactatagaaaaagactagtatttcctaat
ttgaatactacatgttgggctactgggatatctggagattcttttaatgaaaatccattt
gagagcaataaaaatggttctgtatttgaaacattgagtgctgaaataacacctgaaact
actgatttctttgttagtgaaacagagggtgatcctgattgtccttccaaaggctattct
tcaattggaggggcaattgctgcattgaatgaaggaaagtttgtgattgttgtagatgat
gaaagtggggaagtggaaggaaaccttgtcatggcagcatcctttgttagcactgagaca
attgcgtttatggtgaggcacgggtccggcattatttctgtggggatgaaagaagaggat
cttgagaggctaaatcttcctttgatgtcacctgaaaaagaagatgactcttctgctcca
tccttcacaatcacagtggatgcaaagatgggtacatctactggtgtatcggcttcagat
agggctaaaactgtacttgcattgtcatcgcctacttctactcctgaagatttcagaagg
ccaggccatgttttccctctcaagtgtcgaaatggtggggtcttaagaagatttggtcat
actgaggcttcggtagatttagtaatgtcagctggtttgcaagctgtttctgttctttca
gctatagttgataaaaatgatggttctatagcctctatgctcattttggaaaatttggcc
ttggagcacaagattccgattgtctcaataactgatttagtaagatataggagaaagagg
gaaaagcttgttgaaagaactgcagtatcacctttaccaactaaatggggattattccag
gcttactgctaccgttcaaagcttgatggcacagagcatatagctgttgtaaagggtgat
attgggaatggtgaagatgtgttggtacgggtacactcggaatgtttgacaggtgatatt
tttggatcaaggcgatgtgattgcggtaatcagctggatttggcaatgcagttgattgag
gaagctggtagaggtttggttatctatctcagaggccacgaaggacgaggcattggcctt
ggtcacaaacttcaggcctataatttgcaagatcagggccatgatactgttgaagccaat
ctagagctcggctttgctgcagatgctcgtgaatatggcattggtgcacagatgttaagg
gatataggagttcgtaccatgcgcctaatgactaacaatccagcgaaatttacgggttta
aagggctatggtttagcagttgttggacgagtaccagttttgacacccttcacagatgaa
aacaggaagtatttggaaaccaaacgaacaaagatgggtcacatgtatggatctgatgta
cagggaccaattaaggcatccatcaaacggagttcagagaaacaatatccaccccaggaa
agaaaagaaagttga
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