Lycium barbarum (goji berry): 132643535
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Entry
132643535 CDS
T09483
Name
(RefSeq) THO complex subunit 4B
KO
K12881
THO complex subunit 4
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
lbb03015
mRNA surveillance pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132643535
09122 Translation
03013 Nucleocytoplasmic transport
132643535
03015 mRNA surveillance pathway
132643535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132643535
03041 Spliceosome [BR:
lbb03041
]
132643535
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132643535
TREX complex
132643535
Spliceosome [BR:
lbb03041
]
Complex C
Other components
EJC/TREX
132643535
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132643535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
DUF5320
Motif
Other DBs
NCBI-GeneID:
132643535
NCBI-ProteinID:
XP_060215955
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All DBs
Position
6:17909199..17915733
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AA seq
250 aa
AA seq
DB search
MAEAALDMSLDDLIKKNKTNSTANKPRGRGRGAASTSGPTRRFPNRSANRSAPYSTSKAP
VAAWNHNMFAADQAIAFGQAGGRGSSIETGTKLYISNLDYGVSNEDIKELFTEAGGLKRY
AIHYDRSGRSKGTAEVVFSRRQDAIAAVKRYNNVQLDGKPMKIEIVGTNIAAPTAPFPNV
AFGFGDANGVSRSGQARGGGFGRSRGSRGRGHGFRGGNRGRGRGARGEKVSAEDLDADLM
KYHTEAMQTN
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagctttggacatgagtttggacgatctcatcaagaagaataaaaccaac
agtaccgcaaataaacctcgcggcagaggtcgcggcgcagcctccacttccggtcccact
cgccgtttccccaatcgctctgctaatcgatctgcaccttattccacctccaaggctcct
gtggcggcgtggaatcataatatgtttgcggcagatcaagctatcgcctttggacaagcc
ggtggtcggggttcttctatagagactgggacaaagctctacatctcaaaccttgattac
ggcgtctccaatgaggatatcaaggagctcttcacagaagctggtggcctgaaacgctat
gctattcattatgataggagcgggagatcaaagggaacggcagaggtagttttctcacgc
agacaagatgcaatagctgctgttaaaaggtacaacaatgttcagctcgatgggaagcca
atgaagattgaaattgttggaaccaacattgccgctcctactgccccttttcccaatgtt
gcttttggttttggagatgctaatggagtttctagaagtggtcaagcaagaggcggtggt
tttgggaggtcacggggtagtagaggacgtggtcatgggtttcgaggaggcaacagagga
cggggaagaggagcccgcggagaaaaggtatctgcagaagatctagatgctgatctgatg
aaatatcatacagaagcaatgcagacgaactga
DBGET
integrated database retrieval system